RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 KCNJ5P48544 419 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 SERTAD2Q14140 314 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 ZNF311Q5JNZ3 666 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 WDR5BQ86VZ2 330 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 DUSP19Q8WTR2 217 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 CCDC107Q8WV48 283 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 MAP3K3Q99759 626 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 SEMA4CQ9C0C4 833 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 TGIF2Q9GZN2 237 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 ENKD1Q9H0I2 346 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 RPS10P5Q9NQ39 176 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 THADAQ6YHU6 1953 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 ATG2AQ2TAZ0 1938 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 ARID1AO14497 2285 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 SHISA3A0PJX4 238 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 TRAPPC13A5PLN9 417 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 SOCS6O14544 535 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 CLEC3AO75596 197 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 CD63P08962 238 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 CD22P20273 847 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 UQCRC2P22695 453 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 DLSTP36957 453 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 DUSP3P51452 185 aaPredicted RBP10.01□□□□□ -0.81
LSM3-201ENST00000306024 OR1D5P58170 312 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 FABP9Q0Z7S8 132 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 GUCA2BQ16661 112 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 RBMS3Q6XE24 437 aaKnown RBP10.01□□□□□ -0.81
LSM3-201ENST00000306024 PRSS58Q8IYP2 241 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 CDK20Q8IZL9 346 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 OR1J4Q8NGS1 313 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 RHBDD1Q8TEB9 315 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 WNT2BQ93097 391 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 FAM131CQ96AQ9 280 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 OR1F2PQ96R84 312 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 STARD5Q9NSY2 213 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 ACSS1Q9NUB1 689 aaPredicted RBP10.01□□□□□ -0.81
LSM3-201ENST00000306024 ABRACLQ9P1F3 81 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 P2RX2Q9UBL9 471 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 MRPS33Q9Y291 106 aaKnown RBP10.01□□□□□ -0.81
LSM3-201ENST00000306024 AGPAT2O15120 278 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 OR12D1P0DN82 309 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 GTF2F2P13984 249 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 MMP15P51511 669 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 HCCSP53701 268 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 TAS2R43P59537 309 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 REEP5Q00765 189 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 TRAM1Q15629 374 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 TMEM105Q8N8V8 129 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 ABHD4Q8TB40 342 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 GLYATL2Q8WU03 294 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 SLC38A5Q8WUX1 472 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 FBXO17Q96EF6 278 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 SLC35G5Q96KT7 338 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 ZNF354BQ96LW1 612 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 SOSTQ9BQB4 213 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 PAPOLGQ9BWT3 736 aaKnown RBP10.01□□□□□ -0.81
LSM3-201ENST00000306024 TMEM38AQ9H6F2 299 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 RNF215Q9Y6U7 377 aa10.01□□□□□ -0.81
LSM3-201ENST00000306024 CCDC88CQ9P219 2028 aa10□□□□□ -0.81
LSM3-201ENST00000306024 ARRDC5A6NEK1 342 aa10□□□□□ -0.81
LSM3-201ENST00000306024 PATE3B3GLJ2 98 aa10□□□□□ -0.81
LSM3-201ENST00000306024 DVL2O14641 736 aa10□□□□□ -0.81
LSM3-201ENST00000306024 OR10H2O60403 315 aa10□□□□□ -0.81
LSM3-201ENST00000306024 ATP1B1P05026 303 aa10□□□□□ -0.81
LSM3-201ENST00000306024 CSN2P05814 226 aa10□□□□□ -0.81
LSM3-201ENST00000306024 RNF144AP50876 292 aaPredicted RBP10□□□□□ -0.81
LSM3-201ENST00000306024 NR0B2Q15466 257 aa10□□□□□ -0.81
LSM3-201ENST00000306024 PCGF3Q3KNV8 242 aa10□□□□□ -0.81
LSM3-201ENST00000306024 TMEM35AQ53FP2 167 aa10□□□□□ -0.81
LSM3-201ENST00000306024 JAZF1Q86VZ6 243 aa10□□□□□ -0.81
LSM3-201ENST00000306024 LRRC56Q8IYG6 542 aaPredicted RBP10□□□□□ -0.81
LSM3-201ENST00000306024 METTL27Q8N6F8 245 aaPredicted RBP10□□□□□ -0.81
LSM3-201ENST00000306024 DNAAF1Q8NEP3 725 aa10□□□□□ -0.81
LSM3-201ENST00000306024 OR2T33Q8NG76 320 aa10□□□□□ -0.81
LSM3-201ENST00000306024 DNASE2BQ8WZ79 361 aa10□□□□□ -0.81
LSM3-201ENST00000306024 ISG20L2Q9H9L3 353 aaKnown RBP10□□□□□ -0.81
LSM3-201ENST00000306024 EQTNQ9NQ60 294 aa10□□□□□ -0.81
LSM3-201ENST00000306024 OR2S2Q9NQN1 319 aa10□□□□□ -0.81
LSM3-201ENST00000306024 C1GALT1Q9NS00 363 aa10□□□□□ -0.81
LSM3-201ENST00000306024 ZCCHC3Q9NUD5 404 aaKnown RBP10□□□□□ -0.81
LSM3-201ENST00000306024 ING1Q9UK53 422 aaPredicted RBP10□□□□□ -0.81
LSM3-201ENST00000306024 PCDHB10Q9UN67 800 aa10□□□□□ -0.81
LSM3-201ENST00000306024 SF3B6Q9Y3B4 125 aaKnown RBP10□□□□□ -0.81
LSM3-201ENST00000306024 A0A1W2PR77 199 aa10□□□□□ -0.81
LSM3-201ENST00000306024 PRAMEF4O60810 478 aa10□□□□□ -0.81
LSM3-201ENST00000306024 F12P00748 615 aaPredicted RBP10□□□□□ -0.81
LSM3-201ENST00000306024 ANXA2P07355 339 aaKnown RBP10□□□□□ -0.81
LSM3-201ENST00000306024 ACAA1P09110 424 aaPredicted RBP10□□□□□ -0.81
LSM3-201ENST00000306024 ANKRD34CP0C6C1 535 aa10□□□□□ -0.81
LSM3-201ENST00000306024 PRKAR1BP31321 381 aa10□□□□□ -0.81
LSM3-201ENST00000306024 BCL6P41182 706 aa10□□□□□ -0.81
LSM3-201ENST00000306024 MNDAP41218 407 aa10□□□□□ -0.81
LSM3-201ENST00000306024 CRYBA2P53672 197 aa10□□□□□ -0.81
LSM3-201ENST00000306024 CLDN12P56749 244 aa10□□□□□ -0.81
LSM3-201ENST00000306024 LINC00303Q3SY05 128 aa10□□□□□ -0.81
LSM3-201ENST00000306024 ZNF385BQ569K4 471 aa10□□□□□ -0.81
LSM3-201ENST00000306024 PRAMEF9Q5VWM5 478 aa10□□□□□ -0.81
LSM3-201ENST00000306024 OR4C11Q6IEV9 310 aa10□□□□□ -0.81
LSM3-201ENST00000306024 UNQ6126/PRO20091Q6UXV3 157 aa10□□□□□ -0.81
LSM3-201ENST00000306024 GLDNQ6ZMI3 551 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms