RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 SVBPQ8N300 66 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 SLC46A1Q96NT5 459 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 OR6C1Q96RD1 312 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 SELENOIQ9C0D9 397 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 K7ESM1 405 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 CER1O95813 267 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 MEP1BQ16820 701 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 FAM174AQ8TBP5 190 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 LAMA4Q16363 1823 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 SMLR1H3BR10 107 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 SIGLEC6O43699 453 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 SELENOFO60613 162 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 TSFMP43897 325 aaKnown RBP12.87□□□□□ -0.35
PRKCB-201ENST00000303531 AAED1Q7RTV5 226 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 TAAR8Q969N4 342 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 C19orf12Q9NSK7 152 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 STEAP1Q9UHE8 339 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 HSPB6O14558 160 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 TPPPO94811 219 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 PAPLNO95428 1278 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 MFGE8Q08431 387 aaPredicted RBP12.87□□□□□ -0.35
PRKCB-201ENST00000303531 C17orf67Q0P5P2 114 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 SFRP5Q5T4F7 317 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 KCNG3Q8TAE7 436 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 ZIC5Q96T25 663 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 C1orf123Q9NWV4 160 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 APEHP13798 732 aaKnown RBP12.87□□□□□ -0.35
PRKCB-201ENST00000303531 BLVRBP30043 206 aaPredicted RBP12.87□□□□□ -0.35
PRKCB-201ENST00000303531 LIM2P55344 173 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 ISL1P61371 349 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 SLC35A1P78382 337 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 ZMAT1Q5H9K5 638 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 DVL3Q92997 716 aaPredicted RBP12.87□□□□□ -0.35
PRKCB-201ENST00000303531 RPS19P39019 145 aaKnown RBP12.87□□□□□ -0.35
PRKCB-201ENST00000303531 DCDP81605 110 aaKnown RBP12.87□□□□□ -0.35
PRKCB-201ENST00000303531 CD14P08571 375 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 ETV6P41212 452 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 ETV7Q9Y603 341 aa12.87□□□□□ -0.35
PRKCB-201ENST00000303531 LRIT2A6NDA9 550 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 G3V3Y1 287 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 HMGA1P17096 107 aaKnown RBP12.86□□□□□ -0.35
PRKCB-201ENST00000303531 IKZF1Q13422 519 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 LRRC26Q2I0M4 334 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 STEAP1BQ6NZ63 245 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 MBOAT4Q96T53 435 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 GABRA2P47869 451 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 SSR4P51571 173 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 MFAP5Q13361 173 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 C20orf85Q9H1P6 137 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 CTNSO60931 367 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 SRMP19623 302 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 MSMO1Q15800 293 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 AGBL5Q8NDL9 886 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 ZNF223Q9UK11 482 aaPredicted RBP12.86□□□□□ -0.35
PRKCB-201ENST00000303531 UGT2A1Q9Y4X1 527 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 MSTNO14793 375 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 OMGP23515 440 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 HTR4Q13639 388 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 Q6ZNX1 250 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 Q6ZTK2 550 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 RTN4RL1Q86UN2 441 aaPredicted RBP12.86□□□□□ -0.35
PRKCB-201ENST00000303531 SLC22A24Q8N4F4 322 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 NANOGP1Q8N7R0 232 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 GPATCH2Q9NW75 528 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 SLC5A10A0PJK1 596 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 M0QYG6 137 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 LCMT2O60294 686 aaKnown RBP12.86□□□□□ -0.35
PRKCB-201ENST00000303531 AADACL3Q5VUY0 350 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 MARCH3Q86UD3 253 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 TEX19Q8NA77 164 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 OR51D1Q8NGF3 324 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 PKD1L3Q7Z443 1732 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 CACNA1SQ13698 1873 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 DDAH2O95865 285 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 OTUD1Q5VV17 481 aaPredicted RBP12.86□□□□□ -0.35
PRKCB-201ENST00000303531 METRNLQ641Q3 311 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 NKAIN4Q8IVV8 208 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 NXPE3Q969Y0 559 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 ARPC5LQ9BPX5 153 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 A0A1B0GUL6 1792 aa12.86□□□□□ -0.35
PRKCB-201ENST00000303531 MAST2Q6P0Q8 1798 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 ACVR1Q04771 509 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 CST9Q5W186 159 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 PLPP7Q8NBV4 271 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 FAM3DQ96BQ1 224 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 PDXPQ96GD0 296 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 ZNF225Q9UK10 706 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 ARPC4-TTLL3A0A0A6YYG9 625 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 MCRIP1C9JLW8 97 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 EBPQ15125 230 aaKnown RBP12.85□□□□□ -0.35
PRKCB-201ENST00000303531 SYT14P1Q58G82 188 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 GLYATL3Q5SZD4 288 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 SAXO2Q658L1 398 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 OLIG1Q8TAK6 271 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 ZMAT3Q9HA38 289 aaKnown RBP12.85□□□□□ -0.35
PRKCB-201ENST00000303531 ACER3Q9NUN7 267 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 TMX2-CTNND1H3BSU7 103 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 ATP1B1P05026 303 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 IL32P24001 234 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 PGFP49763 221 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms