RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ADAM10O14672 748 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 CCL3P10147 92 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 EIF1P41567 113 aaKnown RBP13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 SLC25A1P53007 311 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 MESTQ5EB52 335 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 KDM8Q8N371 416 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 PARD6AQ9NPB6 346 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 MRPL39Q9NYK5 338 aaKnown RBP13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 GNG8Q9UK08 70 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 STMND1H3BQB6 276 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 J3QRK9 145 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 PLPP3O14495 311 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 TXNDC12O95881 172 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 SFTPDP35247 375 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 RORCP51449 518 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 GBX2P52951 348 aaPredicted RBP13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 OR12D2P58182 307 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 TP53I3Q53FA7 332 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 H1FNTQ75WM6 255 aaPredicted RBP13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF511Q8NB15 262 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 RNF138Q8WVD3 245 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 SGCZQ96LD1 299 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 OR5B2Q96R09 309 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 TEKT2Q9UIF3 430 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 IGLV3-32A0A0A0MS00 114 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 A0A1B0GVG6 124 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 RGS5O15539 181 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 SERPINA7P05543 415 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 DPP4P27487 766 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 BDH1Q02338 343 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 SLC3A1Q07837 685 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 ACSM1Q08AH1 577 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 INAQ16352 499 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 MARCH9Q86YJ5 346 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 PM20D2Q8IYS1 436 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 OR6Q1Q8NGQ2 317 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 KCNS3Q9BQ31 491 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 TXNIPQ9H3M7 391 aa13.09□□□□□ -0.31
SHCBP1-201ENST00000303383 METTL15A6NJ78 407 aa13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 TNFRSF10AO00220 468 aa13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 CASKO14936 926 aa13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 DXOO77932 396 aaKnown RBP13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 ZNF85Q03923 595 aa13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 MELKQ14680 651 aa13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 RAET1LQ5VY80 246 aa13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 B3GNTL1Q67FW5 361 aaPredicted RBP13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 THOC3Q96J01 351 aaKnown RBP13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 ADAD1Q96M93 576 aaKnown RBP13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 POTEKPQ9BYX7 375 aa13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 NMNAT2Q9BZQ4 307 aa13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 FAM86C1Q9NVL1 165 aa13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 CRNNQ9UBG3 495 aaPredicted RBP13.08□□□□□ -0.31
SHCBP1-201ENST00000303383 LRRTM2O43300 516 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 LRP3O75074 770 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 OR2B6P58173 313 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 GGTLC2Q14390 218 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 LINC00299Q6ZSB3 139 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 FAM220AQ7Z4H9 259 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 WDSUB1Q8N9V3 476 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 OR6N2Q8NGY6 317 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 OR6S1Q8NH40 331 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 COQ7Q99807 217 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 ZNF649Q9BS31 505 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 KCNN2Q9H2S1 579 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 CHST11Q9NPF2 352 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 PMF1-BGLAPU3KQ54 211 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 A0A1W2PNU3 283 aaPredicted RBP13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 TVP23AA6NH52 213 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 TFP02787 698 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 ACER2Q5QJU3 275 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 LYPD4Q6UWN0 246 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 VASH1Q7L8A9 365 aaPredicted RBP13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 ZNF485Q8NCK3 441 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 PAQR8Q8TEZ7 354 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 ZBTB8AQ96BR9 441 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 TRMT61AQ96FX7 289 aaKnown RBP13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 HRH3Q9Y5N1 445 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 PEX16Q9Y5Y5 336 aa13.08□□□□□ -0.32
SHCBP1-201ENST00000303383 SPAARA0A1B0GVQ0 90 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 CD8B2A6NJW9 211 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 DKK1O94907 266 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 AKR7A3O95154 331 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 CD8BP10966 210 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 RBMS1P29558 406 aaKnown RBP13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 RPS19P39019 145 aaKnown RBP13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 DAP3P51398 398 aaKnown RBP13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 FABP5Q01469 135 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 POU3F1Q03052 451 aaPredicted RBP13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 SELENBP1Q13228 472 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 ATP1A4Q13733 1029 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 SCAIQ8N9R8 606 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 SLC25A43Q8WUT9 341 aaPredicted RBP13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 GNRHR2Q96P88 292 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 ANGPTL4Q9BY76 406 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 SACM1LQ9NTJ5 587 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 ALKBH4Q9NXW9 302 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 IL11P20809 199 aa13.07□□□□□ -0.32
SHCBP1-201ENST00000303383 ITGA3P26006 1051 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms