RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ALPK2Q86TB3 2170 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 TRAV8-7A0A075B6U6 113 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 A0A1B0GVT2 93 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 H3BSH0 61 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 XRCC3O43542 346 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 THBS1P07996 1170 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 CSF1P09603 554 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 OR4E1P0C645 316 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 LAMP2P13473 410 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 LAG3P18627 525 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 ITGB8P26012 769 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 ZNF345Q14585 488 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 SLC16A13Q7RTY0 426 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 LRRTM1Q86UE6 522 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 CCDC36Q8IYA8 594 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 RXFP4Q8TDU9 374 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 Q96M85 177 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 HSPA12BQ96MM6 686 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 CRB3Q9BUF7 120 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 C1orf198Q9H425 327 aa9.94□□□□□ -0.82
ZNF558-201ENST00000301475 MYEF2Q9P2K5 600 aaKnown RBP9.94□□□□□ -0.82
ZNF558-201ENST00000301475 DOCK9Q9BZ29 2069 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 RAB19A4D1S5 217 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 GGT3PA6NGU5 568 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 DUXAA6NLW8 204 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 CCSO14618 274 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 RPP14O95059 124 aaKnown RBP9.93□□□□□ -0.82
ZNF558-201ENST00000301475 NID1P14543 1247 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 RPS4Y1P22090 263 aaKnown RBP9.93□□□□□ -0.82
ZNF558-201ENST00000301475 AK4P27144 223 aaPredicted RBP9.93□□□□□ -0.82
ZNF558-201ENST00000301475 AGTR1P30556 359 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 SLC6A6P31641 620 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 CSF2RBP32927 897 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 NTHL1P78549 312 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 HTRA4P83105 476 aaPredicted RBP9.93□□□□□ -0.82
ZNF558-201ENST00000301475 PRDX1Q06830 199 aaKnown RBP9.93□□□□□ -0.82
ZNF558-201ENST00000301475 HYAL4Q2M3T9 481 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 NKAIN2Q5VXU1 208 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 GLT8D1Q68CQ7 371 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 H3F3CQ6NXT2 135 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 OR6K6Q8NGW6 343 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 THAP6Q8TBB0 222 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 ZNF350Q9GZX5 532 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 TCF7L1Q9HCS4 588 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 APOBEC3BQ9UH17 382 aaKnown RBP9.93□□□□□ -0.82
ZNF558-201ENST00000301475 SERTAD3Q9UJW9 196 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 ZNF346Q9UL40 294 aaKnown RBP9.93□□□□□ -0.82
ZNF558-201ENST00000301475 A0A1B0GTI1 187 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 MCIDASD6RGH6 385 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 IFNA4P05014 189 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 ITGB2P05107 769 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 AKAIN1P0CW23 69 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 ST8SIA6P61647 398 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 KCNAB1Q14722 419 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 SWI5Q1ZZU3 235 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 GXYLT1Q4G148 440 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 TMEM71Q6P5X7 295 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 RBMS3Q6XE24 437 aaKnown RBP9.93□□□□□ -0.82
ZNF558-201ENST00000301475 TMED4Q7Z7H5 227 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 CLEC1AQ8NC01 280 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 OR2L5Q8NG80 312 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 OR5M8Q8NGP6 311 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 FLRT3Q9NZU0 649 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 STEAP1Q9UHE8 339 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 ZNF780BQ9Y6R6 833 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 CHD9Q3L8U1 2897 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 TBC1D3KA0A087X1G2 549 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 A0A1B0GTH9 108 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 TBC1D3BA6NDS4 549 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 TBC1D3FA6NER0 549 aaPredicted RBP9.93□□□□□ -0.82
ZNF558-201ENST00000301475 HOXA2O43364 376 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 SGCEO43556 437 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 OR2T1O43869 369 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 CTAG2O75638 210 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 FGF18O76093 207 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 OR2F2O95006 317 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 CXCL14O95715 111 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 MAS1P04201 325 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 FABP1P07148 127 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 DLSTP36957 453 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 PNLIPRP2P54317 469 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 BLOC1S1P78537 153 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 OR2F1Q13607 317 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 NR0B2Q15466 257 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 PLEKHN1Q494U1 663 aaPredicted RBP9.93□□□□□ -0.82
ZNF558-201ENST00000301475 LY6G5CQ5SRR4 150 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 C10orf91Q5T1B1 145 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 AVPI1Q5T686 147 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 TBC1D3GQ6DHY5 549 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 C11orf87Q6NUJ2 197 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 OR4N5Q8IXE1 308 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 SPAG16Q8N0X2 631 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 ZNF619Q8N2I2 560 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 TMIEQ8NEW7 156 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 OR1J2Q8NGS2 313 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 C15orf40Q8WUR7 153 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 ASB13Q8WXK3 278 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 PHYHIPLQ96FC7 376 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 NMNAT3Q96T66 252 aa9.93□□□□□ -0.82
ZNF558-201ENST00000301475 MRI1Q9BV20 369 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms