RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 FAM198BQ6UWH4 519 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 RCBTB1Q8NDN9 531 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 CRB3Q9BUF7 120 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 ZNF436Q9C0F3 470 aaPredicted RBP12.31□□□□□ -0.44
CTDP1-202ENST00000299543 NTMQ9P121 344 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 MRTO4Q9UKD2 239 aaKnown RBP12.31□□□□□ -0.44
CTDP1-202ENST00000299543 NOSIPQ9Y314 301 aaKnown RBP12.31□□□□□ -0.44
CTDP1-202ENST00000299543 CABIN1Q9Y6J0 2220 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 A0A0G2JK05 382 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 H7C1C5 153 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 NDUFB2O95178 105 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 LCN6P62502 163 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 BAMBIQ13145 260 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 NHLRC3Q5JS37 347 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 TCTE1Q5JU00 501 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 CBLN2Q8IUK8 224 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 ANKRD9Q96BM1 317 aaPredicted RBP12.3□□□□□ -0.44
CTDP1-202ENST00000299543 LMF1Q96S06 567 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 POT1Q9NUX5 634 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 TAS2R3Q9NYW6 316 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 GTF2A1LQ9UNN4 478 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 YBX2Q9Y2T7 364 aaKnown RBP12.3□□□□□ -0.44
CTDP1-202ENST00000299543 ARL6IP5O75915 188 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 EPXP11678 715 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 MAOAP21397 527 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 FLI1Q01543 452 aaPredicted RBP12.3□□□□□ -0.44
CTDP1-202ENST00000299543 ENPP2Q13822 863 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 SMAD2Q15796 467 aaKnown RBP12.3□□□□□ -0.44
CTDP1-202ENST00000299543 DMKNQ6E0U4 476 aaPredicted RBP12.3□□□□□ -0.44
CTDP1-202ENST00000299543 FAAP20Q6NZ36 180 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 FBXO46Q6PJ61 603 aaPredicted RBP12.3□□□□□ -0.44
CTDP1-202ENST00000299543 TPRA1Q86W33 373 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 BAHD1Q8TBE0 780 aaPredicted RBP12.3□□□□□ -0.44
CTDP1-202ENST00000299543 FOXN4Q96NZ1 517 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 TRIM2Q9C040 744 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 OR10A4Q9H209 315 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 MPDZO75970 2070 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 TVP23AA6NH52 213 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 F13BP05160 661 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 FABP1P07148 127 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 H2AFB2P0C5Z0 115 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 PTBP1P26599 531 aaKnown RBP eCLIP12.3□□□□□ -0.44
CTDP1-202ENST00000299543 ACAA2P42765 397 aaKnown RBP12.3□□□□□ -0.44
CTDP1-202ENST00000299543 COL19A1Q14993 1142 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 HYAL4Q2M3T9 481 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 SLC25A25Q6KCM7 469 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 FCRLAQ7L513 359 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 MEIOBQ8N635 442 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 DEFB119Q8N690 84 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 KCTD12Q96CX2 325 aaKnown RBP12.3□□□□□ -0.44
CTDP1-202ENST00000299543 SCMH1Q96GD3 660 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 STACQ99469 402 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 GAS2L1Q99501 681 aaPredicted RBP12.3□□□□□ -0.44
CTDP1-202ENST00000299543 TRPV4Q9HBA0 871 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 LYRM4Q9HD34 91 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 SLC39A1Q9NY26 324 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 IKZF2Q9UKS7 526 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 C2orf16Q68DN1 1984 aa12.3□□□□□ -0.44
CTDP1-202ENST00000299543 WNT1P04628 370 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 ACTC1P68032 377 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 ACTA1P68133 377 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 FGL1Q08830 312 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 MGAT2Q10469 447 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 SLC36A2Q495M3 483 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 LEG1Q6P5S2 330 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 MAMSTRQ6ZN01 415 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 Q6ZTK2 550 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 RPLP0P6Q8NHW5 317 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 Q96M85 177 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 ZNF285Q96NJ3 590 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 GAL3ST1Q99999 423 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 TSPAN10Q9H1Z9 355 aaPredicted RBP12.29□□□□□ -0.44
CTDP1-202ENST00000299543 EMC7Q9NPA0 242 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 INPP5EQ9NRR6 644 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 DNAJB12Q9NXW2 375 aaKnown RBP12.29□□□□□ -0.44
CTDP1-202ENST00000299543 RCE1Q9Y256 329 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 TCRBV21S2A2A0A5A6 115 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 TRABD2BA6NFA1 517 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 KHDRBS3O75525 346 aaKnown RBP12.29□□□□□ -0.44
CTDP1-202ENST00000299543 F12P00748 615 aaPredicted RBP12.29□□□□□ -0.44
CTDP1-202ENST00000299543 RNF224P0DH78 156 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 AQP2P41181 271 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 CDK5R1Q15078 307 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 C14orf105Q9NVL8 296 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 A0A087WV62 115 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 A0A1B0GTH9 108 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 OR6C68A6NDL8 312 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 KRBOX1C9JBD0 128 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 SERPINA3P01011 423 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 OR8G3PP0DMU2 310 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 SELLP14151 372 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 PVALBP20472 110 aaPredicted RBP12.29□□□□□ -0.44
CTDP1-202ENST00000299543 RPS4Y1P22090 263 aaKnown RBP12.29□□□□□ -0.44
CTDP1-202ENST00000299543 CTHP32929 405 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 GDNFP39905 211 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 HOXA1P49639 335 aaPredicted RBP12.29□□□□□ -0.44
CTDP1-202ENST00000299543 MC2RQ01718 297 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 HHEXQ03014 270 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 ULK3Q6PHR2 472 aa12.29□□□□□ -0.44
CTDP1-202ENST00000299543 LRRN1Q6UXK5 716 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms