RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SLC25A1P53007 311 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 ALKBH1Q13686 389 aaKnown RBP12.38□□□□□ -0.43
CDH8-201ENST00000299345 Q499Y3 187 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 SHISA6Q6ZSJ9 500 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 TIGD4Q8IY51 512 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 ZNF248Q8NDW4 579 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 ZFAND1Q8TCF1 268 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 PIGKQ92643 395 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 NUDT9Q9BW91 350 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 LAT2Q9GZY6 243 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDH8-201ENST00000299345 MTCH2Q9Y6C9 303 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 ANKRD61A6NGH8 418 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 MAS1P04201 325 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 EVI2BP34910 448 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 RPS4XP62701 263 aaKnown RBP12.38□□□□□ -0.43
CDH8-201ENST00000299345 PLA1AQ53H76 456 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 FCAMRQ8WWV6 532 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 LIN7BQ9HAP6 207 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 EXOSC3Q9NQT5 275 aaKnown RBP12.38□□□□□ -0.43
CDH8-201ENST00000299345 SPAG17Q6Q759 2223 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 AIPO00170 330 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 ANXA3P12429 323 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 ADH7P40394 386 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 BEST4Q8NFU0 473 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 TAAR8Q969N4 342 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 MVB12AQ96EY5 273 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 FOXN4Q96NZ1 517 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 GPX7Q96SL4 187 aaPredicted RBP12.38□□□□□ -0.43
CDH8-201ENST00000299345 C7orf50Q9BRJ6 194 aaKnown RBP12.38□□□□□ -0.43
CDH8-201ENST00000299345 NMNAT2Q9BZQ4 307 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 LANCL2Q9NS86 450 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 RNF215Q9Y6U7 377 aa12.38□□□□□ -0.43
CDH8-201ENST00000299345 ARID1BQ8NFD5 2236 aaPredicted RBP12.37□□□□□ -0.43
CDH8-201ENST00000299345 KRT33AO76009 404 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 AHSA1O95433 338 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 ZNF117Q03924 483 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 SYNPRQ8TBG9 265 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 HAVCR2Q8TDQ0 301 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 HSD17B8Q92506 261 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 WDR76Q9H967 626 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 TAS2R10Q9NYW0 307 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 KLHL9Q9P2J3 617 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 RCE1Q9Y256 329 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 FABP7O15540 132 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 FAM157BP0CG42 384 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 TFPIP10646 304 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 ART1P52961 327 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 NANOS3P60323 173 aaKnown RBP12.37□□□□□ -0.43
CDH8-201ENST00000299345 EMC4Q5J8M3 183 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 PM20D2Q8IYS1 436 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 ZNF431Q8TF32 576 aaPredicted RBP12.37□□□□□ -0.43
CDH8-201ENST00000299345 PMEPA1Q969W9 287 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 ZNF285Q96NJ3 590 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 PHF7Q9BWX1 381 aaPredicted RBP12.37□□□□□ -0.43
CDH8-201ENST00000299345 ACTR6Q9GZN1 396 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 AUNIPQ9H7T9 357 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 FKRPQ9H9S5 495 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 TRAV36DV7A0A075B6V5 113 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 SPARCP09486 303 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 RPS11P62280 158 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDH8-201ENST00000299345 LINC01590Q5TEZ4 76 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 GPR148Q8TDV2 347 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 OMA1Q96E52 524 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 OR2M2Q96R28 347 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 GTPBP2Q9BX10 602 aaKnown RBP12.37□□□□□ -0.43
CDH8-201ENST00000299345 RABL2AQ9UBK7 228 aaPredicted RBP12.37□□□□□ -0.43
CDH8-201ENST00000299345 RABL2BQ9UNT1 228 aa12.37□□□□□ -0.43
CDH8-201ENST00000299345 UNC13CQ8NB66 2214 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 CDC40O60508 579 aaKnown RBP eCLIP12.36□□□□□ -0.43
CDH8-201ENST00000299345 GABRA4P48169 554 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 SDR16C5Q8N3Y7 309 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 OR8H1Q8NGG4 311 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 GDF15Q99988 308 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 A0A1W2PR77 199 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 ECDO95905 644 aaPredicted RBP12.36□□□□□ -0.43
CDH8-201ENST00000299345 CD1AP06126 327 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 CBFBQ13951 182 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 LRRN1Q6UXK5 716 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 OR6V1Q8N148 313 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 OR1L3Q8NH93 324 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 SMIM4Q8WVI0 70 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 GCDHQ92947 438 aaPredicted RBP12.36□□□□□ -0.43
CDH8-201ENST00000299345 RNF170Q96K19 258 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 TSPAN32Q96QS1 320 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 MRI1Q9BV20 369 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 DCTN6O00399 190 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 SOX1O00570 391 aaPredicted RBP12.36□□□□□ -0.43
CDH8-201ENST00000299345 ZNF432O94892 652 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 ASAH2BP0C7U1 165 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 LTBQ06643 244 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 TOMM34Q15785 309 aaPredicted RBP12.36□□□□□ -0.43
CDH8-201ENST00000299345 C1QL3Q5VWW1 255 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 OTPQ5XKR4 325 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 SLC35D2Q76EJ3 337 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 KRT77Q7Z794 578 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 TDHQ8IZJ6 230 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 FAM71CQ8NEG0 241 aa12.36□□□□□ -0.43
CDH8-201ENST00000299345 THAP3Q8WTV1 239 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms