RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 FAM122BQ7Z309 247 aa12.33□□□□□ -0.44
SKA3-201ENST00000298260 TMEM200AQ86VY9 491 aa12.33□□□□□ -0.44
SKA3-201ENST00000298260 FGF13Q92913 245 aa12.33□□□□□ -0.44
SKA3-201ENST00000298260 UBE2E3Q969T4 207 aa12.33□□□□□ -0.44
SKA3-201ENST00000298260 C19orf43Q9BQ61 176 aa12.33□□□□□ -0.44
SKA3-201ENST00000298260 NCDNQ9UBB6 729 aa12.33□□□□□ -0.44
SKA3-201ENST00000298260 THSD7BQ9C0I4 1608 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 LATO43561 262 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 AIFM1O95831 613 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 GALTP07902 379 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 C6P13671 934 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 DAOP14920 347 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 NDUFS1P28331 727 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 AVPR2P30518 371 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 MECP2P51608 486 aaKnown RBP12.32□□□□□ -0.44
SKA3-201ENST00000298260 NR0B1P51843 470 aaKnown RBP12.32□□□□□ -0.44
SKA3-201ENST00000298260 TDGQ13569 410 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 OR1Q1Q15612 314 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 NKPD1Q17RQ9 610 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 FAM46CQ5VWP2 391 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 CORO6Q6QEF8 472 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 SLC35F2Q8IXU6 374 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 DND1Q8IYX4 353 aaKnown RBP12.32□□□□□ -0.44
SKA3-201ENST00000298260 ARMC10Q8N2F6 343 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 GTPBP8Q8N3Z3 284 aaPredicted RBP12.32□□□□□ -0.44
SKA3-201ENST00000298260 GALNT16Q8N428 558 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 DMBX1Q8NFW5 382 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 ADAMTS15Q8TE58 950 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 TSSK2Q96PF2 358 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 AIF1LQ9BQI0 150 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 LAT2Q9GZY6 243 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 GPN3Q9UHW5 284 aaPredicted RBP12.32□□□□□ -0.44
SKA3-201ENST00000298260 NOP16Q9Y3C1 178 aaKnown RBP12.32□□□□□ -0.44
SKA3-201ENST00000298260 A0A0B4J2A0 478 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 H7C417 338 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 ITGA10O75578 1167 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 IGHV2-70P01814 119 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 RPN2P04844 631 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 OR8G3PP0DMU2 310 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 NQO2P16083 231 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 ZNF3P17036 446 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 SDHAP31040 664 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 ID2Q02363 134 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 KRT33BQ14525 404 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 TCTN1Q2MV58 587 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 TMEM205Q6UW68 189 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 TMPPEQ6ZT21 453 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 TMEM25Q86YD3 366 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 OR6N1Q8NGY5 312 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 MIB2Q96AX9 1013 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 CPEB1Q9BZB8 566 aaKnown RBP12.32□□□□□ -0.44
SKA3-201ENST00000298260 GAREM1Q9H706 876 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 ACKR4Q9NPB9 350 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 MTFP1Q9UDX5 166 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 SHPKQ9UHJ6 478 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 WDR45Q9Y484 360 aa12.32□□□□□ -0.44
SKA3-201ENST00000298260 EEF1E1-BLOC1S5C9J1V9 151 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 ZNF749O43361 778 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 CTNSO60931 367 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 PAPLNO95428 1278 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 EOMESO95936 686 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 CASRP41180 1078 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 ID4P47928 161 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 CENPAP49450 140 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 PEA15Q15121 130 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 C11orf87Q6NUJ2 197 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 JAZF1Q86VZ6 243 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 FIBINQ8TAL6 211 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 PTCHD1Q96NR3 888 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 MYADMQ96S97 322 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 NMNAT3Q96T66 252 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 CHRDQ9H2X0 955 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 TCF7L1Q9HCS4 588 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 INPP5EQ9NRR6 644 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 UQCC1Q9NVA1 299 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 SLC23A2Q9UGH3 650 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 A0A0A6YYD5 115 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 A0A0D9SG52 128 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 C5orf52A6NGY3 159 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 LILRB5O75023 590 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 HTR3BO95264 441 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 SMIM6P0DI80 62 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 F2RL1P55085 397 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 ECH1Q13011 328 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 SGCAQ16586 387 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 ZNF658BQ4V348 819 aaPredicted RBP12.31□□□□□ -0.44
SKA3-201ENST00000298260 ZNF511Q8NB15 262 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 HSPA12BQ96MM6 686 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 CNTNAP3BQ96NU0 1288 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 IER2Q9BTL4 223 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 VN1R3Q9BXE9 311 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 MBD2Q9UBB5 411 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 EPHA6Q9UF33 1036 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 KCNE5Q9UJ90 142 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 DTX4Q9Y2E6 619 aa12.31□□□□□ -0.44
SKA3-201ENST00000298260 MYO15AQ9UKN7 3530 aa12.3□□□□□ -0.44
SKA3-201ENST00000298260 C9JQL5 133 aa12.3□□□□□ -0.44
SKA3-201ENST00000298260 SNAPINO95295 136 aa12.3□□□□□ -0.44
SKA3-201ENST00000298260 NGFRP08138 427 aa12.3□□□□□ -0.44
SKA3-201ENST00000298260 ZNF28P17035 718 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms