RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 CYR61O00622 381 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 UPK3AO75631 287 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 CBX7O95931 251 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 HPP00738 406 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 IGKV1D-16P01601 117 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 RPA2P15927 270 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 IGFALSP35858 605 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 C2orf27AQ580R0 203 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 FAM78AQ5JUQ0 283 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 LRRN1Q6UXK5 716 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 OR4N2Q8NGD1 307 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 OR5AK2Q8NH90 309 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 CTHRC1Q96CG8 243 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 ALG12Q9BV10 488 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 DNTTIP1Q9H147 329 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 SRMSQ9H3Y6 488 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 FGF22Q9HCT0 170 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 LYRM4Q9HD34 91 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 RXFP3Q9NSD7 469 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 FRRS1LQ9P0K9 344 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 MRM2Q9UI43 246 aaKnown RBP9.29□□□□□ -0.92
CCDC36-201ENST00000296449 PILRAQ9UKJ1 303 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 TRAV8-7A0A075B6U6 113 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 TRBV5-5A0A0J9YX44 114 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 A0A1B0GW55 424 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 TMEM72A0PK05 275 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 URADA6NGE7 173 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 SPDEFO95238 335 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 EGFP01133 1207 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 RLN2P04090 185 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 GUSBP08236 651 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 DUX4L2P0CJ85 424 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 DUX4L3P0CJ86 424 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 DUX4L4P0CJ87 422 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 DUX4L5P0CJ88 424 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 DUX4L6P0CJ89 424 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 DUX4L7P0CJ90 424 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 MPGP29372 298 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 MNX1P50219 401 aaPredicted RBP9.29□□□□□ -0.92
CCDC36-201ENST00000296449 PSG6Q00889 435 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 SGCGQ13326 291 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 ALKBH1Q13686 389 aaKnown RBP9.29□□□□□ -0.92
CCDC36-201ENST00000296449 ETFDHQ16134 617 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 LIPNQ5VXI9 398 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 FCRL6Q6DN72 434 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 TSSK4Q6SA08 328 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 VITQ6UXI7 678 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 DGAT2L6Q6ZPD8 337 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 ABHD13Q7L211 337 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 OR52R1Q8NGF1 315 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 OR6N1Q8NGY5 312 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 HOXB13Q92826 284 aaPredicted RBP9.29□□□□□ -0.92
CCDC36-201ENST00000296449 TSSK2Q96PF2 358 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 SLC25A32Q9H2D1 315 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 SLC6A15Q9H2J7 730 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 DUX4Q9UBX2 424 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 MOKQ9UQ07 419 aa9.29□□□□□ -0.92
CCDC36-201ENST00000296449 EML5Q05BV3 1969 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 A0A1B0GTH9 108 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 H0YC42 278 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 APOC3P02656 99 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 MAS1P04201 325 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 ANXA2P07355 339 aaKnown RBP9.28□□□□□ -0.92
CCDC36-201ENST00000296449 CSF1P09603 554 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 ZNF10P21506 573 aaPredicted RBP9.28□□□□□ -0.92
CCDC36-201ENST00000296449 CD96P40200 585 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 CDKN2AP42771 156 aaKnown RBP9.28□□□□□ -0.92
CCDC36-201ENST00000296449 SORDQ00796 357 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 GUCA2AQ02747 115 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 EIF2B5Q13144 721 aaKnown RBP9.28□□□□□ -0.92
CCDC36-201ENST00000296449 YOD1Q5VVQ6 348 aaPredicted RBP9.28□□□□□ -0.92
CCDC36-201ENST00000296449 LEG1Q6P5S2 330 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 OR51S1Q8NGJ8 323 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 STK35Q8TDR2 534 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 TNFAIP8L1Q8WVP5 186 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 CCDC74AQ96AQ1 378 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 PAWRQ96IZ0 340 aaKnown RBP9.28□□□□□ -0.92
CCDC36-201ENST00000296449 SLC38A3Q99624 504 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 APOOQ9BUR5 198 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 MFFQ9GZY8 342 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 LMAN2LQ9H0V9 348 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 COL4A2P08572 1712 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 TRBV23OR9-2A0A075B6M9 112 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 GGT3PA6NGU5 568 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 TNFSF14O43557 240 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 ABHD16AO95870 558 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 TACSTD2P09758 323 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 RAB3AP20336 220 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 GPR143P51810 404 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 EFNB2P52799 333 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 RPS4XP62701 263 aaKnown RBP9.28□□□□□ -0.92
CCDC36-201ENST00000296449 HTRA4P83105 476 aaPredicted RBP9.28□□□□□ -0.92
CCDC36-201ENST00000296449 PDGFRLQ15198 375 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 ANKRD16Q6P6B7 361 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 SLC16A9Q7RTY1 509 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 FAM220AQ7Z4H9 259 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 MCATQ8IVS2 390 aaKnown RBP9.28□□□□□ -0.92
CCDC36-201ENST00000296449 RELL2Q8NC24 303 aaPredicted RBP9.28□□□□□ -0.92
CCDC36-201ENST00000296449 CAMKVQ8NCB2 501 aa9.28□□□□□ -0.92
CCDC36-201ENST00000296449 OR10AC1Q8NH08 325 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms