RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 DNMT3BQ9UBC3 853 aaKnown RBP14.18□□□□□ -0.14
SHROOM4-201ENST00000289292 ADAM18Q9Y3Q7 739 aa14.18□□□□□ -0.14
SHROOM4-201ENST00000289292 HRH3Q9Y5N1 445 aa14.18□□□□□ -0.14
SHROOM4-201ENST00000289292 HMGN4O00479 90 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 CHRM4P08173 479 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 ASAH1Q13510 395 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 NDUFB11Q9NX14 153 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 ITGB4P16144 1822 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 LALBAP00709 142 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 TEAD1P28347 426 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 SLC16A11Q8NCK7 471 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 MARCH5Q9NX47 278 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 FABP5Q01469 135 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 BDH1Q02338 343 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 SFRP5Q5T4F7 317 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 BATF2Q8N1L9 274 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 ASB17Q8WXJ9 295 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 RAB3CQ96E17 227 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 SHDQ96IW2 340 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 SPIN2AQ99865 258 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 SPIN2BQ9BPZ2 258 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 GABARAPL3Q9BY60 117 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 ERVMER34-1Q9H9K5 563 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 C2orf72A6NCS6 295 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 B4DXG7 233 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 ONECUT3O60422 494 aaPredicted RBP14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 ATP1B1P05026 303 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 FPR3P25089 353 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 RPL23AP62750 156 aaKnown RBP14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 GLYATL3Q5SZD4 288 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 CD276Q5ZPR3 534 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 SFXN2Q96NB2 322 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 OPALINQ96PE5 141 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 CMSS1Q9BQ75 279 aaKnown RBP14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 TMEM43Q9BTV4 400 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 TMEM231Q9H6L2 316 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 WDR76Q9H967 626 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 ZFP57Q9NU63 452 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 IGLV3-10A0A075B6K4 115 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 NSA2O95478 260 aaKnown RBP14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 NPY4RP50391 375 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 RAB30Q15771 203 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 HENMT1Q5T8I9 393 aaKnown RBP14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 OTPQ5XKR4 325 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 FRMD1Q8N878 549 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 TBC1D20Q96BZ9 403 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 ARL5BQ96KC2 179 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 ZNF768Q9H5H4 540 aaKnown RBP14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 C19orf12Q9NSK7 152 aa14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 PURGQ9UJV8 347 aaKnown RBP14.17□□□□□ -0.14
SHROOM4-201ENST00000289292 HOXB9P17482 250 aaPredicted RBP14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 MRPS34P82930 218 aaKnown RBP14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 CLINT1Q14677 625 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 FAM160A2Q8N612 972 aaPredicted RBP14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 OLIG1Q8TAK6 271 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 DUS3LQ96G46 650 aaKnown RBP14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 HHATLQ9HCP6 504 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 TMEM30AQ9NV96 361 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 ADAM29Q9UKF5 820 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 ZNF264O43296 627 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 SLCO2B1O94956 709 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 SSX9Q7RTT3 188 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 TMEM200AQ86VY9 491 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 WBP2Q969T9 261 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 MARC2Q969Z3 335 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 FGGYQ96C11 551 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 RNF170Q96K19 258 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 VN1R3Q9BXE9 311 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 LOXHD1Q8IVV2 1947 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 CD53P19397 219 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 Q6ZTK2 550 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 FAM3DQ96BQ1 224 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 PTDSS2Q9BVG9 487 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 MRPS28Q9Y2Q9 187 aaKnown RBP14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 URGCP-MRPS24S4R325 110 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 FAM155AB1AL88 458 aaPredicted RBP14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 LILRB5O75023 590 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 OR52N1Q8NH53 320 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 MS4A4AQ96JQ5 239 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 SELENOIQ9C0D9 397 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 B4GALT7Q9UBV7 327 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 ENTPD2Q9Y5L3 495 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 SERINC4A6NH21 518 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 CNN3Q15417 329 aaKnown RBP14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 TMEM217Q8N7C4 229 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 HPSE2Q8WWQ2 592 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 OCSTAMPQ9BR26 566 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 CHRDQ9H2X0 955 aa14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 ISG20L2Q9H9L3 353 aaKnown RBP14.16□□□□□ -0.14
SHROOM4-201ENST00000289292 GPRIN2O60269 458 aa14.15□□□□□ -0.14
SHROOM4-201ENST00000289292 OR13C7P0DN81 318 aa14.15□□□□□ -0.14
SHROOM4-201ENST00000289292 NKAIN2Q5VXU1 208 aa14.15□□□□□ -0.14
SHROOM4-201ENST00000289292 HAVCR2Q8TDQ0 301 aa14.15□□□□□ -0.14
SHROOM4-201ENST00000289292 RSC1A1Q92681 617 aa14.15□□□□□ -0.14
SHROOM4-201ENST00000289292 MRPL22Q9NWU5 206 aaKnown RBP14.15□□□□□ -0.14
SHROOM4-201ENST00000289292 SLC5A10A0PJK1 596 aa14.15□□□□□ -0.14
SHROOM4-201ENST00000289292 HSBP1L1C9JCN9 74 aa14.15□□□□□ -0.14
SHROOM4-201ENST00000289292 BHLHE40O14503 412 aa14.15□□□□□ -0.14
SHROOM4-201ENST00000289292 LTC4SQ16873 150 aa14.15□□□□□ -0.14
SHROOM4-201ENST00000289292 ORAI1Q96D31 301 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms