RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 RPS5P46782 204 aaKnown RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 AVPR1BP47901 424 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 NUDT6P53370 316 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 EPHA4P54764 986 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 MAZP56270 477 aaKnown RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 PRPS1P60891 318 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 RBX1P62877 108 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 MAP4K2Q12851 820 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 C1DQ13901 141 aaKnown RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 DUSP5Q16690 384 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 MICBQ29980 383 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 PRTGQ2VWP7 1150 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 CXXC5Q7LFL8 322 aaKnown RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 BHLHA15Q7RTS1 189 aaPredicted RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 MRGPREQ86SM8 312 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 SFTPA2Q8IWL1 248 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 ARRDC1Q8N5I2 433 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 CLDN22Q8N7P3 220 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 DMBX1Q8NFW5 382 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 OR52M1Q8NGK5 317 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 DYNC2LI1Q8TCX1 351 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 HOXB13Q92826 284 aaPredicted RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 SLC41A3Q96GZ6 507 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 CD180Q99467 661 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 SLC38A3Q99624 504 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 MCHR1Q99705 422 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 WFDC6Q9BQY6 131 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 RAB33BQ9H082 229 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 ABCB10Q9NRK6 738 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 CIB4A0PJX0 185 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 CPSF4LA6NMK7 179 aaKnown RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 M0R082 166 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 ENTPD6O75354 484 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 SOX14O95416 240 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 IFNA6P05013 189 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 NID1P14543 1247 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 ST6GAL1P15907 406 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 SDHAP31040 664 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 PTGER1P34995 402 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 GPR4P46093 362 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 RGS6P49758 472 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 DEFA1P59665 94 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 DEFA3P59666 94 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 NHLH2Q02577 135 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 C1orf61Q13536 156 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 GINS1Q14691 196 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 TRMT12Q53H54 448 aaKnown RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 SLC35D3Q5M8T2 416 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 FAM69AQ5T7M9 428 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 ZNF836Q6ZNA1 936 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 GDPGP1Q6ZNW5 385 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 MBOAT2Q6ZWT7 520 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 OR4N5Q8IXE1 308 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 VWA5B2Q8N398 1253 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 SLC25A45Q8N413 288 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 LRRC18Q8N456 261 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 C12orf45Q8N5I9 185 aaPredicted RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 EIF4E3Q8N5X7 224 aaKnown RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 AMER2Q8N7J2 671 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 OR9Q1Q8NGQ5 310 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 NDNFQ8TB73 568 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 KIAA1143Q96AT1 154 aaPredicted RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 DMRTB1Q96MA1 342 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 LMF2Q9BU23 707 aaKnown RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 DSN1Q9H410 356 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 AMBNQ9NP70 447 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 ADAP2Q9NPF8 381 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 MED9Q9NWA0 146 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 TESQ9UGI8 421 aaKnown RBP6.94□□□□□ -1.3
TRIM42-201ENST00000286349 CLDN16Q9Y5I7 305 aa6.94□□□□□ -1.3
TRIM42-201ENST00000286349 CEP192Q8TEP8 1941 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 A0A1W2PPH5 198 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 TRAPPC13A5PLN9 417 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 ZNF860A6NHJ4 632 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 FCMRO60667 390 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 TPST2O60704 377 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 LDB3O75112 727 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 NKX2-2O95096 273 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 RLN2P04090 185 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 CTXN2P0C2S0 81 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 GIMD1P0DJR0 217 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 GAAP10253 952 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 IL11P20809 199 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 PAICSP22234 425 aaKnown RBP6.93□□□□□ -1.3
TRIM42-201ENST00000286349 LIPAP38571 399 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 MECP2P51608 486 aaKnown RBP6.93□□□□□ -1.3
TRIM42-201ENST00000286349 SELENOVP59797 346 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 SNTB1Q13884 538 aaKnown RBP6.93□□□□□ -1.3
TRIM42-201ENST00000286349 COL9A2Q14055 689 aaPredicted RBP6.93□□□□□ -1.3
TRIM42-201ENST00000286349 SF3A2Q15428 464 aaKnown RBP6.93□□□□□ -1.3
TRIM42-201ENST00000286349 HLA-BQ31612 363 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 ACTBL2Q562R1 376 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 HACD4Q5VWC8 232 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 KANSL1Q7Z3B3 1105 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 LHFPL4Q7Z7J7 247 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 C17orf82Q86X59 251 aaPredicted RBP6.93□□□□□ -1.3
TRIM42-201ENST00000286349 ARHGEF39Q8N4T4 335 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 TCEANCQ8N8B7 351 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 PROKR2Q8NFJ6 384 aa6.93□□□□□ -1.3
TRIM42-201ENST00000286349 WDR36Q8NI36 951 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms