RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SSNA1O43805 119 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 SOX30O94993 753 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 CST1P01037 141 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 ALDOBP05062 364 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 C2P06681 752 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 HOXC6P09630 235 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 POLR2EP19388 210 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 PRKAR2BP31323 418 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 CD80P33681 288 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 HOXA1P49639 335 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 SGSHP51688 502 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 PIGHQ14442 188 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 ZNF699Q32M78 642 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 TPRG1LQ5T0D9 272 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 ZNF770Q6IQ21 691 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 ASB18Q6ZVZ8 466 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 TECPR1Q7Z6L1 1165 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 CATSPER3Q86XQ3 398 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 MFSD6LQ8IWD5 586 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 C10orf67Q8IYJ2 551 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 ZNF786Q8N393 782 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 OR2L3Q8NG85 312 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 MED8Q96G25 268 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 TGS1Q96RS0 853 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 MBOAT4Q96T53 435 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 NMUR2Q9GZQ4 415 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 ATP13A3Q9H7F0 1226 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 TIGARQ9NQ88 270 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 PARP14Q460N5 1801 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TEX13DA0A0J9YY54 714 aaPredicted RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 PRAMEF26H0Y7S4 382 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 PRMT5O14744 637 aaPredicted RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 CDK2AP2O75956 126 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TNNC2P02585 160 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 LGALS2P05162 132 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TUBG1P23258 451 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 CEACAM8P31997 349 aaPredicted RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 XKP51811 444 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 STX4Q12846 297 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 ZNF234Q14588 700 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TMEM187Q14656 261 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 RBMS2Q15434 407 aaKnown RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 PSG3Q16557 428 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 EIPR1Q53HC9 387 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 ZNF470Q6ECI4 717 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 RFWD3Q6PCD5 774 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 ENPP6Q6UWR7 440 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 COX15Q7KZN9 410 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 C5orf24Q7Z6I8 188 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 OAFQ86UD1 273 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 CADM2Q8N3J6 435 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TMEM239Q8WW34 195 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 RTP4Q96DX8 246 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TM4SF19Q96DZ7 209 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TOX2Q96NM4 488 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 LGMNQ99538 433 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TMEM175Q9BSA9 504 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 PAPOLGQ9BWT3 736 aaKnown RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 GATA5Q9BWX5 397 aaPredicted RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 ACTR3CQ9C0K3 210 aaPredicted RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 OPN3Q9H1Y3 402 aaPredicted RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 CXXC4Q9H2H0 198 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 ARRDC1-AS1Q9H2J1 176 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 ANKRD19PQ9H560 264 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 DHX35Q9H5Z1 703 aaKnown RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 CLK4Q9HAZ1 481 aaKnown RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 KCNJ16Q9NPI9 418 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TUBG2Q9NRH3 451 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 FBXL4Q9UKA2 621 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 FRMPD3Q5JV73 1810 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 ATP6AP2A0A1C7CYW4 349 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 MYMKA6NI61 221 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 PFDN6O15212 129 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TRAPPC3O43617 180 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 RPN2P04844 631 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 CAPN2P17655 700 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 ELK3P41970 407 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 P2RY1P47900 373 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 DNASE1L1P49184 302 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 AP2S1P53680 142 aaPredicted RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 CDH17Q12864 832 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TRIP6Q15654 476 aaKnown RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 SPANXN4Q5MJ08 99 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 FKBP1CQ5VVH2 108 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TMPRSS11AQ6ZMR5 421 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 ANKRD37Q7Z713 158 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 UBE2E3Q969T4 207 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 MLXIPLQ9NP71 852 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 MRPS30Q9NP92 439 aaKnown RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 NRN1Q9NPD7 142 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 TAAR2Q9P1P5 351 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 SLC2A6Q9UGQ3 507 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 PURGQ9UJV8 347 aaKnown RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 MRPS28Q9Y2Q9 187 aaKnown RBP2.41□□□□□ -2.02
CHD1-201ENST00000284049 INSL6Q9Y581 213 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 A0A1W2PNV4 684 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 GOLGA8MH3BSY2 632 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 DFFAO00273 331 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 HPRP00739 348 aa2.41□□□□□ -2.02
CHD1-201ENST00000284049 BCKDHAP12694 445 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms