RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 FKRPQ9H9S5 495 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 ENAMQ9NRM1 1142 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 TBCCD1Q9NVR7 557 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 PLPP2O43688 288 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 ZFAND5O76080 213 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 F8A1P23610 371 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 MYL9P24844 172 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 RPS18P62269 152 aaKnown RBP16.22■□□□□ 0.19
CAPN1-201ENST00000279247 SIRPAP78324 504 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 FOXF1Q12946 379 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 CCBE1Q6UXH8 406 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-201ENST00000279247 GDPD3Q7L5L3 318 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 CELF2-AS1Q8N7Q2 184 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 ZBTB44Q8NCP5 570 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 ACOD1A6NK06 481 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 A8MVM7 634 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 RAD1O60671 282 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 RENP00797 406 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 SYPP08247 313 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 SLC25A35Q3KQZ1 300 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 YIPF7Q8N8F6 280 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 NEDD4LQ96PU5 975 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 NMNAT2Q9BZQ4 307 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 B3GAT2Q9NPZ5 323 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 SLC39A1Q9NY26 324 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 ST6GALNAC2Q9UJ37 374 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 RASD1Q9Y272 281 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 VSTM2BA6NLU5 285 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 AKR7A3O95154 331 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 IL7P13232 177 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 DEFA1P59665 94 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 DEFA3P59666 94 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 C19orf57Q0VDD7 668 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 MEP1BQ16820 701 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 GPX7Q96SL4 187 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-201ENST00000279247 MED18Q9BUE0 208 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 SRRQ9GZT4 340 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 SLC25A18Q9H1K4 315 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 INIPQ9NRY2 104 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 ANKRD10Q9NXR5 420 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 FBXO4Q9UKT5 387 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 PCDHGB7Q9Y5F8 929 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 B3GALT1Q9Y5Z6 326 aa16.21■□□□□ 0.19
CAPN1-201ENST00000279247 LAMA5O15230 3695 aa16.21■□□□□ 0.18
CAPN1-201ENST00000279247 SLC16A7O60669 478 aa16.21■□□□□ 0.18
CAPN1-201ENST00000279247 SOX2P48431 317 aa16.21■□□□□ 0.18
CAPN1-201ENST00000279247 C17orf67Q0P5P2 114 aa16.21■□□□□ 0.18
CAPN1-201ENST00000279247 SNTA1Q13424 505 aa16.21■□□□□ 0.18
CAPN1-201ENST00000279247 RNASE12Q5GAN4 147 aaKnown RBP16.21■□□□□ 0.18
CAPN1-201ENST00000279247 DMKNQ6E0U4 476 aaPredicted RBP16.21■□□□□ 0.18
CAPN1-201ENST00000279247 NRARPQ7Z6K4 114 aa16.21■□□□□ 0.18
CAPN1-201ENST00000279247 C5orf34Q96MH7 638 aa16.21■□□□□ 0.18
CAPN1-201ENST00000279247 POLHQ9Y253 713 aa16.21■□□□□ 0.18
CAPN1-201ENST00000279247 CNOT1A5YKK6 2376 aaKnown RBP16.21■□□□□ 0.18
CAPN1-201ENST00000279247 ETV6P41212 452 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 DUSP3P51452 185 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-201ENST00000279247 ACTA2P62736 377 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 ACTG2P63267 376 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 BDH1Q02338 343 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 EFR3AQ14156 821 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 CDK5R1Q15078 307 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 OR5L2Q8NGL0 311 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 HPS1Q92902 700 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 NEURL2Q9BR09 285 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 C19orf25Q9UFG5 118 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-201ENST00000279247 LAMP5Q9UJQ1 280 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 TBC1D24Q9ULP9 559 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 RPH3AQ9Y2J0 694 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-201ENST00000279247 AK6Q9Y3D8 172 aaKnown RBP16.2■□□□□ 0.18
CAPN1-201ENST00000279247 NOX1Q9Y5S8 564 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 LNP1A1A4G5 178 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 YKT6O15498 198 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 IDH3BO43837 385 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 LDOC1O95751 146 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-201ENST00000279247 APOA1P02647 267 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 TAS2R43P59537 309 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 NANOS3P60323 173 aaKnown RBP16.2■□□□□ 0.18
CAPN1-201ENST00000279247 RDH10Q8IZV5 341 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 SLC43A2Q8N370 569 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 ZNF433Q8N7K0 673 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-201ENST00000279247 SAMD12Q8N8I0 201 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 OR2T4Q8NH00 348 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 JSRP1Q96MG2 331 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-201ENST00000279247 FBXL2Q9UKC9 423 aa16.2■□□□□ 0.18
CAPN1-201ENST00000279247 ISPDA4D126 451 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 ADAM10O14672 748 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 DOK2O60496 412 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 ITGA10O75578 1167 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 MRPL14Q6P1L8 145 aaKnown RBP16.19■□□□□ 0.18
CAPN1-201ENST00000279247 SLC23A3Q6PIS1 610 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 NUBPLQ8TB37 319 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 SMIM19Q96E16 107 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 RASL10BQ96S79 203 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 CCNL2Q96S94 520 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-201ENST00000279247 COQ7Q99807 217 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 MED29Q9NX70 200 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 KCNG2Q9UJ96 466 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 COL5A1P20908 1838 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-201ENST00000279247 SFTPDP35247 375 aa16.19■□□□□ 0.18
CAPN1-201ENST00000279247 OR8K3Q8NH51 312 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms