RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 LSAMPQ13449 338 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 PAQR6Q6TCH4 344 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 SLC25A18Q9H1K4 315 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 IL20Q9NYY1 176 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 CAPNS1P04632 268 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 LIPAP38571 399 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 PPIAP62937 165 aaKnown RBP13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 SLC10A1Q14973 349 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 STK11Q15831 433 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 HES5Q5TA89 166 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 GALNTL5Q7Z4T8 443 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF721Q8TF20 911 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 WACQ9BTA9 647 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 SVILO95425 2214 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 CXCL13O43927 109 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 IGHV3-9P01782 118 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 ZNF12P17014 697 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 HTR2AP28223 471 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 HCCSP53701 268 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 SIRPAP78324 504 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 SF3B4Q15427 424 aaKnown RBP eCLIP13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 DESI1Q6ICB0 168 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 TMPRSS11FQ6ZWK6 438 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 KCTD20Q7Z5Y7 419 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 HAVCR2Q8TDQ0 301 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 C1orf198Q9H425 327 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 PLCXD1Q9NUJ7 323 aa13.15□□□□□ -0.31
PDLIM2-201ENST00000265810 DCDC2BA2VCK2 349 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 TIAF1O95411 115 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 CSN2P05814 226 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 ZNF45Q02386 682 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 TGFBR3Q03167 851 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 MALLQ13021 153 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 AIMP2Q13155 320 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 OR1C1Q15619 314 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 ZNF74Q16587 644 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 MEP1BQ16820 701 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 SYT6Q5T7P8 510 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 LRRN1Q6UXK5 716 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 TMEM99Q8N816 258 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 ASB17Q8WXJ9 295 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 LANCL2Q9NS86 450 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 SIGLEC7Q9Y286 467 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 HYAL3O43820 417 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 SPI1P17947 270 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 ALDH3B2P48448 385 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 RPL22L1Q6P5R6 122 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 SLC16A14Q7RTX9 510 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 SLC15A4Q8N697 577 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 SETD6Q8TBK2 473 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 FNDC8Q8TC99 324 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 GHSRQ92847 366 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 ENAMQ9NRM1 1142 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 ERVK13-1Q9NX77 482 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 TMEM184BQ9Y519 407 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 PCDHGB2Q9Y5G2 931 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 RP1P56715 2156 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 A0A1W2PQL4 384 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 GPR171O14626 319 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 SCG5P05408 212 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 ZNF806P0C7X5 589 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 PSKH1P11801 424 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 FGF5P12034 268 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 ETV5P41161 510 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 ETV1P50549 477 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 RPS25P62851 125 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 TOMM34Q15785 309 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 ABHD12BQ7Z5M8 362 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 SMAP2Q8WU79 429 aaPredicted RBP13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 NANOS1Q8WY41 292 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 WDR54Q9H977 334 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 MMP25Q9NPA2 562 aa13.14□□□□□ -0.31
PDLIM2-201ENST00000265810 IGHV3-15A0A0B4J1V0 119 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 GCM2O75603 506 aaPredicted RBP13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 RPS27P42677 84 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 LSM11P83369 360 aaKnown RBP eCLIP13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 SLC46A3Q7Z3Q1 461 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 OR11G2Q8NGC1 345 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 OR4Q3Q8NH05 313 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 STK35Q8TDR2 534 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 TAAR8Q969N4 342 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 GPR87Q9BY21 358 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 MFRPQ9BY79 579 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 C14orf119Q9NWQ9 140 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 SLC7A11Q9UPY5 501 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 B3GALT5Q9Y2C3 310 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 GSTT2BP0CG30 244 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 CLUP10909 449 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 TGFBR2P37173 567 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 SLC35D3Q5M8T2 416 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 OTPQ5XKR4 325 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 USP51Q70EK9 711 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 TIGD4Q8IY51 512 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 RNASE11Q8TAA1 199 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 NPRL2Q8WTW4 380 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 CPNE2Q96FN4 548 aaPredicted RBP13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 HHLA2Q9UM44 414 aa13.13□□□□□ -0.31
PDLIM2-201ENST00000265810 PCDHGA3Q9Y5H0 932 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms