RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 ASB6Q9NWX5 421 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 B3GAT1Q9P2W7 334 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 LSM2Q9Y333 95 aaKnown RBP20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 DCHS1Q96JQ0 3298 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 AKAP13Q12802 2813 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 A0A1W2PRG6 482 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 GJE1A6NN92 205 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 KLRC4-KLRK1H3BQV0 150 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 SPI1P17947 270 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 MEOX1P50221 254 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 ETV1P50549 477 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 TNFSF10P50591 281 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 SLC35D3Q5M8T2 416 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 ZNF367Q7RTV3 350 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 PXKQ7Z7A4 578 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 CLVS1Q8IUQ0 354 aaPredicted RBP20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 GHDCQ8N2G8 530 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 NANOGP1Q8N7R0 232 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 OR51G2Q8NGK0 314 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 KLHL15Q96M94 604 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 SFXN2Q96NB2 322 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 TNFRSF10DQ9UBN6 386 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 ERGIC3Q9Y282 383 aa20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 EXOSC1Q9Y3B2 195 aaKnown RBP20.52■□□□□ 0.88
SMARCB1-201ENST00000263121 ACVR1BP36896 505 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 RFC3P40938 356 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 SLC16A1P53985 500 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 GFRA1P56159 465 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 LGALS3BPQ08380 585 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 GGTLC2Q14390 218 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 ZNF766Q5HY98 468 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 PAQR6Q6TCH4 344 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 NHLRC1Q6VVB1 395 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 ZFP62Q8NB50 900 aaPredicted RBP20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 PROKR2Q8NFJ6 384 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 ZNRF4Q8WWF5 429 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 SMPDL3BQ92485 455 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 OR5M11Q96RB7 305 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 MND1Q9BWT6 205 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 ADGRL4Q9HBW9 690 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 RPRD1BQ9NQG5 326 aaKnown RBP20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 A0A0J9YW62 118 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 AQP7P3A6NL99 342 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 ZNF814B7Z6K7 855 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 MYL12AP19105 171 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 H3F3AP84243 136 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 HSF1Q00613 529 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 LCN1P1Q5VSP4 162 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 GPR107Q5VW38 600 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 TMEM251Q8N6I4 163 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 TMEM178AQ8NBL3 297 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 ASB10Q8WXI3 467 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 COG8Q96MW5 612 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 ZNF649Q9BS31 505 aa20.51■□□□□ 0.87
SMARCB1-201ENST00000263121 CCDC160A6NGH7 325 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 H7C1C5 153 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 LINC01387J3KSC0 135 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 XKRYO14609 159 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 ARHGEF9O43307 516 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 RENP00797 406 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 SBK2P0C263 348 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 LIMS3P0CW19 117 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 LIMS4P0CW20 117 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 ATP6V1E1P36543 226 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 DAP3P51398 398 aaKnown RBP20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 LCN6P62502 163 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 POU3F1Q03052 451 aaPredicted RBP20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 POU4F2Q12837 409 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 DOC2BQ14184 412 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 MELKQ14680 651 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 TIGD6Q17RP2 521 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 GGNQ86UU5 652 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 MFRPQ9BY79 579 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 RSL24D1Q9UHA3 163 aaKnown RBP20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 CSAG2Q9Y5P2 127 aa20.5■□□□□ 0.87
SMARCB1-201ENST00000263121 FREM3P0C091 2139 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 LOC102725191A0A1B0GVB3 256 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 TMEM129A0AVI4 362 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 PRSS37A4D1T9 235 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 GLCEO94923 617 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 IFNGR1P15260 489 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 MAGEA5P43359 124 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 CSNK2A1P68400 391 aaPredicted RBP20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 PLGLB1Q02325 96 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 PON3Q15166 354 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 LINC01590Q5TEZ4 76 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 SLC35D2Q76EJ3 337 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 OR51L1Q8NGJ5 315 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 ZNF420Q8TAQ5 688 aaPredicted RBP20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 ZMYND19Q96E35 227 aaPredicted RBP20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 YIPF6Q96EC8 236 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 SMAD5Q99717 465 aaKnown RBP20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 VSX1Q9NZR4 365 aaPredicted RBP20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 NOX1Q9Y5S8 564 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 ASPMQ8IZT6 3477 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 CELSR3Q9NYQ7 3312 aa20.49■□□□□ 0.87
SMARCB1-201ENST00000263121 A6NIZ1 184 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 FAM166BA8MTA8 275 aa20.48■□□□□ 0.87
SMARCB1-201ENST00000263121 NPIPA5E9PKD4 350 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms