RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 GSG1Q2KHT4 349 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 CRTC2Q53ET0 693 aaPredicted RBP17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 TMEM201Q5SNT2 666 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 PYHIN1Q6K0P9 492 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 LANCL3Q6ZV70 420 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 PGAP1Q75T13 922 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 SLC16A11Q8NCK7 471 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 ELP5Q8TE02 316 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 TMEM203Q969S6 136 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 P2RX2Q9UBL9 471 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 PRAMEF27A3QJZ7 478 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 SULT1C2O00338 296 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 SLC28A2O43868 658 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 TOXO94900 526 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 ACAA1P09110 424 aaPredicted RBP17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 FUT7Q11130 342 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 PUM1Q14671 1186 aaKnown RBP eCLIP17.26■□□□□ 0.352e-6■■□□□ 13.4
COL4A3BP-201ENST00000261415 TMEM164Q5U3C3 297 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 TMPRSS12Q86WS5 348 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 DOHHQ9BU89 302 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 METTL17Q9H7H0 456 aaPredicted RBP17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 ISYNA1Q9NPH2 558 aa17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 ZNF275Q9NSD4 429 aaPredicted RBP17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 NXT1Q9UKK6 140 aaKnown RBP17.26■□□□□ 0.35
COL4A3BP-201ENST00000261415 PLSCR5A0PG75 271 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 SYNDIG1LA6NDD5 238 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 C9J4A7 227 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 PRKYO43930 277 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 RP2O75695 350 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 SELLP14151 372 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 ST3GAL2Q16842 350 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 PAN3Q58A45 887 aaKnown RBP17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 CDRT4Q8N9R6 151 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 OR1S1Q8NH92 325 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 ADAMTS15Q8TE58 950 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 ELMOD3Q96FG2 381 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 TMEM19Q96HH6 336 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 GAL3ST1Q99999 423 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 TMPRSS13Q9BYE2 586 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 SEMA4CQ9C0C4 833 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 FOXJ2Q9P0K8 574 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 ANGPT4Q9Y264 503 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 KCNE3Q9Y6H6 103 aa17.25■□□□□ 0.35
COL4A3BP-201ENST00000261415 ANXA2P2A6NMY6 339 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 GFRA3O60609 400 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 PRAMEF2O60811 474 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 ALOX12BO75342 701 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 GCM2O75603 506 aaPredicted RBP17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 SOX30O94993 753 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 ACP2P11117 423 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 NFYAP23511 347 aaPredicted RBP17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 EMDP50402 254 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 CRISP1P54107 249 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 EMP2P54851 167 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 ERVK-25P63136 954 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 FUT5Q11128 374 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 SYPL1Q16563 259 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 EXOSC6Q5RKV6 272 aaKnown RBP17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 REEP3Q6NUK4 255 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 ZCCHC12Q6PEW1 402 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 TMEM91Q6ZNR0 172 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 SLC30A8Q8IWU4 369 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 CRB3Q9BUF7 120 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 SPRY4Q9C004 299 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 NDUFAF4Q9P032 175 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 EXTL2Q9UBQ6 330 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 SPIN1Q9Y657 262 aaPredicted RBP17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 AHCTF1Q8WYP5 2266 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 DUXAA6NLW8 204 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 C5orf58C9J3I9 102 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 CLPSP04118 112 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 PVALBP20472 110 aaPredicted RBP17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 CRYBA2P53672 197 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 ZNF155Q12901 538 aaPredicted RBP17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 DUSP5Q16690 384 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 HAGHLQ6PII5 290 aaPredicted RBP17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 C6orf15Q6UXA7 325 aaPredicted RBP17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 BEND4Q6ZU67 534 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 TIPARPQ7Z3E1 657 aaKnown RBP17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 TMEM17Q86X19 198 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 CDS1Q92903 461 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 SLC35A4Q96G79 324 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 SENP5Q96HI0 755 aaPredicted RBP17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 RNF32Q9H0A6 362 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 OR10A5Q9H207 317 aa17.24■□□□□ 0.35
COL4A3BP-201ENST00000261415 SMIM30A4D0T7 59 aa17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 NR2F1P10589 423 aa17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 GABRA5P31644 462 aa17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 MAP3K8P41279 467 aa17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 VEGFCP49767 419 aa17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 PCBP3P57721 371 aaKnown RBP17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 SPIBQ01892 262 aa17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 TPBGQ13641 420 aa17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 RPS26P11Q5JNZ5 115 aaPredicted RBP17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 VASNQ6EMK4 673 aa17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 ANKRD37Q7Z713 158 aa17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 MARCH9Q86YJ5 346 aa17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 ZNF615Q8N8J6 731 aa17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 OR14A16Q8NHC5 309 aa17.23■□□□□ 0.35
COL4A3BP-201ENST00000261415 GLYATL2Q8WU03 294 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms