RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 BRICD5Q6PL45 260 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 ABHD4Q8TB40 342 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 ST7LQ8TDW4 575 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 RAB39BQ96DA2 213 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 PPA2Q9H2U2 334 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 ZMAT3Q9HA38 289 aaKnown RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 MSTNO14793 375 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 GRPP07492 148 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 CRMP1Q14194 572 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 RTL10Q7L3V2 364 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 OR56B1Q8NGI3 324 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 ANKRD9Q96BM1 317 aaPredicted RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 RBMXL1Q96E39 390 aaKnown RBP11.18□□□□□ -0.62
COL8A1-201ENST00000261037 CNTNAP3Q9BZ76 1288 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 A4GALTQ9NPC4 353 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 FGF21Q9NSA1 209 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 SEMA4GQ9NTN9 838 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 HSFX1Q9UBD0 423 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 PCDHGA5Q9Y5G8 931 aa11.18□□□□□ -0.62
COL8A1-201ENST00000261037 MAST2Q6P0Q8 1798 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 GPR137BO60478 399 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 CLN5O75503 358 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 RAB40ALP0C0E4 278 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 CDK4P11802 303 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 IRS1P35568 1242 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 MFGE8Q08431 387 aaPredicted RBP11.17□□□□□ -0.62
COL8A1-201ENST00000261037 MFAP5Q13361 173 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 MSMO1Q15800 293 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 TMPRSS7Q7RTY8 843 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 PLPP7Q8NBV4 271 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 BHLHE23Q8NDY6 225 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 RAB40AQ8WXH6 277 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF583Q96ND8 569 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 SAMD10Q9BYL1 202 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.17□□□□□ -0.62
COL8A1-201ENST00000261037 SNX11Q9Y5W9 270 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 SLC22A23A1A5C7 686 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 K7EPK0 472 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 NXPH2O95156 264 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 ABHD16AO95870 558 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 TCN2P20062 427 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 PRKACBP22694 351 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 EDDM3AQ14507 147 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 NHSL2Q5HYW2 709 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 SFXN4Q6P4A7 337 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 OR5AS1Q8N127 324 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 KDM8Q8N371 416 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 FAM71E2Q8N5Q1 922 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 OR5M11Q96RB7 305 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 DCLRE1CQ96SD1 692 aaKnown RBP11.17□□□□□ -0.62
COL8A1-201ENST00000261037 LIN7BQ9HAP6 207 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 THAP10Q9P2Z0 257 aaPredicted RBP11.17□□□□□ -0.62
COL8A1-201ENST00000261037 PIGLQ9Y2B2 252 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 A6NHS1 94 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 RNF212BA8MTL3 300 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 PLA2G7Q13093 441 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 TMEM217Q8N7C4 229 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF511Q8NB15 262 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 C1QTNF6Q9BXI9 259 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 EVA1AQ9H8M9 152 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 SULT1C2O00338 296 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 AKR7A3O95154 331 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 CLEC2LP0C7M8 214 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 CALCBP10092 127 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 NME2P22392 152 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 CSNK1G2P78368 415 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 C17orf67Q0P5P2 114 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF813Q6ZN06 617 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 Q6ZTK2 550 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 RBMXL3Q8N7X1 1067 aaKnown RBP11.17□□□□□ -0.62
COL8A1-201ENST00000261037 VN1R2Q8NFZ6 395 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 TMEM106AQ96A25 262 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 TINAGL1Q9GZM7 467 aaPredicted RBP11.17□□□□□ -0.62
COL8A1-201ENST00000261037 GNB4Q9HAV0 340 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 SPHK1Q9NYA1 384 aa11.17□□□□□ -0.62
COL8A1-201ENST00000261037 CLDN24A6NM45 220 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF587BE7ETH6 402 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 SOCS7O14512 581 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 IMPA2O14732 288 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 CRYZL1O95825 349 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 IGHEP01854 428 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 GABREP78334 506 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 ESCO2Q56NI9 601 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 DCXRQ7Z4W1 244 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 EGFL6Q8IUX8 553 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 MOKQ9UQ07 419 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 CLDN1O95832 211 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 SLC2A1P11166 492 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 HCCSP53701 268 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 GPR176Q14439 515 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 YIF1BQ5BJH7 314 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 STEAP3Q658P3 488 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 OGFOD3Q6PK18 319 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 Q6ZSR9 355 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 SYT13Q7L8C5 426 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 FJX1Q86VR8 437 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 RBM45Q8IUH3 476 aaKnown RBP11.16□□□□□ -0.62
COL8A1-201ENST00000261037 RDH10Q8IZV5 341 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 FRMD1Q8N878 549 aa11.16□□□□□ -0.62
COL8A1-201ENST00000261037 ARSGQ96EG1 525 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms