RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 NPAS1Q99742 590 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 GAL3ST1Q99999 423 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 RNF32Q9H0A6 362 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 NIPAL2Q9H841 368 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 DDAH2O95865 285 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 OGFOD3Q6PK18 319 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 C9orf62Q8N4C0 152 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 LSM14AQ8ND56 463 aaKnown RBP13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 GHSRQ92847 366 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 MARVELD1Q9BSK0 173 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 TRIM36Q9NQ86 728 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 OCIAD1Q9NX40 245 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 SEC14L5O43304 696 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 LAMTOR5O43504 91 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 EDNRAP25101 427 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 GABRA5P31644 462 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 PPICP45877 212 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 CREB3L2Q70SY1 520 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 DUSP18Q8NEJ0 188 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 ZNF721Q8TF20 911 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 THEM6Q8WUY1 208 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 FGF11Q92914 225 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 ZNF501Q96CX3 271 aaPredicted RBP13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 SLC25A18Q9H1K4 315 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 DUSP15Q9H1R2 295 aaPredicted RBP13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 MED28Q9H204 178 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 SYT4Q9H2B2 425 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 BRD7Q9NPI1 651 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 MED11Q9P086 117 aa13.32□□□□□ -0.28
TRAFD1-201ENST00000257604 A0A087WUJ7 227 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 TMEM72A0PK05 275 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 POM121CA8CG34 1229 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 RNF13O43567 381 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 TFP02787 698 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 MT-ND5P03915 603 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 SQSTM1Q13501 440 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 TPBGQ13641 420 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 MELKQ14680 651 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 EBPQ15125 230 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 NKAIN1Q4KMZ8 207 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 LCN10Q6JVE6 187 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 SLC35D2Q76EJ3 337 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 CDH24Q86UP0 819 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 DHRS9Q9BPW9 319 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 GRHPRQ9UBQ7 328 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 DCTN6O00399 190 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 ZNF354AO60765 605 aaPredicted RBP13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 PTP4A3O75365 173 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 CDKN2AP42771 156 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 ZNF81P51508 661 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 SHBQ15464 509 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 ELAVL1Q15717 326 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 PRSS45Q7RTY3 260 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 OR6N2Q8NGY6 317 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 ANGPTL6Q8NI99 470 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 DNAJA4Q8WW22 397 aaPredicted RBP13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 TAAR8Q969N4 342 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 SLC46A1Q96NT5 459 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 ADGRL4Q9HBW9 690 aa13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 PPIEQ9UNP9 301 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 AK6Q9Y3D8 172 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-201ENST00000257604 TRBV2A0A0J9YWF9 115 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 IRGMA1A4Y4 181 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 ACOD1A6NK06 481 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 CLPSP04118 112 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 OR8G3PP0DMU2 310 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 MST1P26927 711 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 SF3A2Q15428 464 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 ZNF141Q15928 474 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 KLHL26Q53HC5 615 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 TRIM61Q5EBN2 209 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 PRAMEF20Q5VT98 475 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 WBP2NLQ6ICG8 309 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 ARHGAP11AQ6P4F7 1023 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 ZNF767PQ75MW2 155 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 GLRX5Q86SX6 157 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 TOR1AIP2Q8NFQ8 470 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 HSD17B8Q92506 261 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 CRB3Q9BUF7 120 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 WWTR1Q9GZV5 400 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 ENAMQ9NRM1 1142 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 SLC22A11Q9NSA0 550 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 KLRF1Q9NZS2 232 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 PCDHGB7Q9Y5F8 929 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 TRBV11-1A0A0K0K1C0 115 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 OR6A2O95222 327 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 F10P00742 488 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 PSMD4P55036 377 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 TIGD3Q6B0B8 471 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 D2HGDHQ8N465 521 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 DNASE2BQ8WZ79 361 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 KISS1RQ969F8 398 aaPredicted RBP13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 CCDC74BQ96LY2 380 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 JSRP1Q96MG2 331 aaPredicted RBP13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 ANKRD10Q9NXR5 420 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 GLTPQ9NZD2 209 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 RARRES3Q9UL19 164 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 COPS3Q9UNS2 423 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 TECTAO75443 2155 aa13.3□□□□□ -0.28
TRAFD1-201ENST00000257604 SIGLEC5O15389 551 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms