RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 SLC41A3Q96GZ6 507 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 ITCHQ96J02 903 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 ZNF75AQ96N20 296 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 OXGR1Q96P68 337 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 OR2M2Q96R28 347 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 DOK1Q99704 481 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 KCNS3Q9BQ31 491 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 C19orf24Q9BVV8 132 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 BPESC1Q9GZL8 116 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 RMND5AQ9H871 391 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 GPR35Q9HC97 309 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 B3GNT2Q9NY97 397 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 SLC25A37Q9NYZ2 338 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 FBXO9Q9UK97 447 aaPredicted RBP8.92□□□□□ -0.98
VPS50-201ENST00000251739 PCDHB14Q9Y5E9 798 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 GMEB1Q9Y692 573 aa8.92□□□□□ -0.98
VPS50-201ENST00000251739 TRBV5-3A0A0A0MS03 114 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 A0A1B0GWA3 101 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 AIM2O14862 343 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 SLC43A1O75387 559 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 STAMBPO95630 424 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 HPRP00739 348 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 KITP10721 976 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 ETS2P15036 469 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 ZNF43P17038 809 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 NPR2P20594 1047 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 GRPRP30550 384 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 PRKAR1BP31321 381 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 THBS4P35443 961 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 ARR3P36575 388 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 RPS5P46782 204 aaKnown RBP8.91□□□□□ -0.98
VPS50-201ENST00000251739 POLR2JP52435 117 aaKnown RBP8.91□□□□□ -0.98
VPS50-201ENST00000251739 MSMPQ1L6U9 139 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 CEACAM16Q2WEN9 425 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 ZNF311Q5JNZ3 666 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 LRIF1Q5T3J3 769 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 FAM69AQ5T7M9 428 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 ATG16L1Q676U5 607 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 DHRS4L2Q6PKH6 230 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 ZNF627Q7L945 461 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 CROCCP2Q86T23 111 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 C10orf111Q8N326 155 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 ANKRD42Q8N9B4 389 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 ZNF540Q8NDQ6 660 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 C1orf159Q96HA4 380 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 VRK1Q99986 396 aaPredicted RBP8.91□□□□□ -0.98
VPS50-201ENST00000251739 PAIP2Q9BPZ3 127 aaKnown RBP8.91□□□□□ -0.98
VPS50-201ENST00000251739 CENPHQ9H3R5 247 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 ARMC7Q9H6L4 198 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 CHODLQ9H9P2 273 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 NOX3Q9HBY0 568 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 CRLF2Q9HC73 371 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 SLC52A3Q9NQ40 469 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 KLHL14Q9P2G3 628 aa8.91□□□□□ -0.98
VPS50-201ENST00000251739 TRAV36DV7A0A075B6V5 113 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 TMEM247A6NEH6 219 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 ZNF99A8MXY4 864 aaPredicted RBP8.9□□□□□ -0.98
VPS50-201ENST00000251739 hCG_2039718K7EN88 272 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 CLIC1O00299 241 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 UBDO15205 165 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 OR2T1O43869 369 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 ANP32DO95626 131 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 IL2RGP31785 369 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 SRSF2Q01130 221 aaKnown RBP8.9□□□□□ -0.98
VPS50-201ENST00000251739 RIN1Q13671 783 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 CR1LQ2VPA4 569 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 PHYHD1Q5SRE7 291 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 C6orf10Q5SRN2 563 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 FAM91A1Q658Y4 838 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 NXNQ6DKJ4 435 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 SLC2A7Q6PXP3 512 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 H1FNTQ75WM6 255 aaPredicted RBP8.9□□□□□ -0.98
VPS50-201ENST00000251739 MDP1Q86V88 176 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 FUNDC1Q8IVP5 155 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 WDFY1Q8IWB7 410 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 CCDC36Q8IYA8 594 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 CDK20Q8IZL9 346 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 ZCCHC24Q8N2G6 241 aaKnown RBP8.9□□□□□ -0.98
VPS50-201ENST00000251739 MIER2Q8N344 545 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 ZNF786Q8N393 782 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 SVOPLQ8N434 492 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 PIK3C3Q8NEB9 887 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 OR6S1Q8NH40 331 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 SLC38A4Q969I6 547 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 ZBTB9Q96C00 473 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 TLCD1Q96CP7 247 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 SLC25A36Q96CQ1 311 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 ANKRD27Q96NW4 1050 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 RAB1BQ9H0U4 201 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 RASSF4Q9H2L5 321 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 RAD21L1Q9H4I0 556 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 ZNF224Q9NZL3 707 aa8.9□□□□□ -0.98
VPS50-201ENST00000251739 A0A087WUJ7 227 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 A0A0B4J2E0 115 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 A0A1B0GX12 115 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 LRP5LA4QPB2 252 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 MS4A18H0YCH9 400 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 TPST1O60507 370 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 TPST2O60704 377 aa8.89□□□□□ -0.99
VPS50-201ENST00000251739 SEC14L2O76054 403 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms