RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.35□□□□□ -0.75
RFPL3-201ENST00000249007 UBQLN4Q9NRR5 601 aa10.35□□□□□ -0.75
RFPL3-201ENST00000249007 ACSS1Q9NUB1 689 aaPredicted RBP10.35□□□□□ -0.75
RFPL3-201ENST00000249007 VPS29Q9UBQ0 182 aa10.35□□□□□ -0.75
RFPL3-201ENST00000249007 CORINQ9Y5Q5 1042 aa10.35□□□□□ -0.75
RFPL3-201ENST00000249007 A0A0G2JMP0 313 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 A0A0X1KG70 313 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 MYO1GB0I1T2 1018 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 PCDH7O60245 1069 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 MRPL33O75394 65 aaKnown RBP10.34□□□□□ -0.75
RFPL3-201ENST00000249007 GCH1P30793 250 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 GPR6P46095 362 aaPredicted RBP10.34□□□□□ -0.75
RFPL3-201ENST00000249007 GGTA1PQ4G0N0 100 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 ABLIM2Q6H8Q1 611 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 ZAR1Q86SH2 424 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 ANKFN1Q8N957 763 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 OR4M2Q8NGB6 313 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 TFAP2CQ92754 450 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 KATNB1Q9BVA0 655 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 RACGAP1Q9H0H5 632 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 MMP27Q9H306 513 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 SCPEP1Q9HB40 452 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 G6PC2Q9NQR9 355 aa10.34□□□□□ -0.75
RFPL3-201ENST00000249007 IGHV1-18A0A0C4DH31 117 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 A0A1W2PPW3 197 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 A0A1W2PQD3 144 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 E7ESA3 106 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 GPR171O14626 319 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 WNT9BO14905 357 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 PRSS23O95084 383 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 NTF4P34130 210 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 DIO1P49895 249 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 TOMM34Q15785 309 aaPredicted RBP10.33□□□□□ -0.76
RFPL3-201ENST00000249007 FAM83EQ2M2I3 478 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 VPS26BQ4G0F5 336 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 C3orf33Q6P1S2 294 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 GALNT18Q6P9A2 607 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 CBLN3Q6UW01 205 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 CCBE1Q6UXH8 406 aaPredicted RBP10.33□□□□□ -0.76
RFPL3-201ENST00000249007 ZNF767PQ75MW2 155 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 C1QL4Q86Z23 238 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 CTAGE3PQ8IX95 158 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 CENPLQ8N0S6 344 aaPredicted RBP10.33□□□□□ -0.76
RFPL3-201ENST00000249007 OR4F6Q8NGB9 312 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 PHOSPHO1Q8TCT1 267 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 ELP4Q96EB1 424 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 NSUN5Q96P11 429 aaKnown RBP10.33□□□□□ -0.76
RFPL3-201ENST00000249007 SLC38A2Q96QD8 506 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 DCUN1D5Q9BTE7 237 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 TMPRSS13Q9BYE2 586 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 ZMAT3Q9HA38 289 aaKnown RBP10.33□□□□□ -0.76
RFPL3-201ENST00000249007 TAS2R7Q9NYW3 318 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 KIF17Q9P2E2 1029 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 UPB1Q9UBR1 384 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 SNX6Q9UNH7 406 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 A3GALT2U3KPV4 340 aa10.33□□□□□ -0.76
RFPL3-201ENST00000249007 DNAJC9-AS1A6NH13 148 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 ZNF716A6NP11 495 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 POC1B-GALNT4F8VUJ3 575 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 AKAP10O43572 662 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 NKX2-2O95096 273 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 PROCP04070 461 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 ADRA2AP08913 450 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 BMP2P12643 396 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 PRKACAP17612 351 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 NTSP30990 170 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 SPRP35270 261 aaPredicted RBP10.32□□□□□ -0.76
RFPL3-201ENST00000249007 PPP5CP53041 499 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 SUMO3P55854 103 aaPredicted RBP10.32□□□□□ -0.76
RFPL3-201ENST00000249007 LMO4P61968 165 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 ZP4Q12836 540 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 FLOT2Q14254 428 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 RAB39AQ14964 217 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 ESCO2Q56NI9 601 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 FGD3Q5JSP0 725 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 TTC33Q6PID6 262 aaPredicted RBP10.32□□□□□ -0.76
RFPL3-201ENST00000249007 CASP12Q6UXS9 341 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 SIGLECL1Q8N7X8 197 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 PTGR2Q8N8N7 351 aaPredicted RBP10.32□□□□□ -0.76
RFPL3-201ENST00000249007 SYT14Q8NB59 555 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 C16orf78Q8WTQ4 265 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 GLIPR2Q9H4G4 154 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 IFT22Q9H7X7 185 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 DCAF16Q9NXF7 216 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 PDP1Q9P0J1 537 aaPredicted RBP10.32□□□□□ -0.76
RFPL3-201ENST00000249007 ZNF221Q9UK13 617 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 PCTPQ9UKL6 214 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 ICAM5Q9UMF0 924 aa10.32□□□□□ -0.76
RFPL3-201ENST00000249007 RBMX2Q9Y388 322 aaKnown RBP10.32□□□□□ -0.76
RFPL3-201ENST00000249007 VSTM5A8MXK1 200 aa10.31□□□□□ -0.76
RFPL3-201ENST00000249007 SULT2B1O00204 365 aa10.31□□□□□ -0.76
RFPL3-201ENST00000249007 OIP5O43482 229 aa10.31□□□□□ -0.76
RFPL3-201ENST00000249007 B3GALNT1O75752 331 aa10.31□□□□□ -0.76
RFPL3-201ENST00000249007 KCNK2O95069 426 aa10.31□□□□□ -0.76
RFPL3-201ENST00000249007 IGFBP1P08833 259 aaPredicted RBP10.31□□□□□ -0.76
RFPL3-201ENST00000249007 NPR2P20594 1047 aa10.31□□□□□ -0.76
RFPL3-201ENST00000249007 DDCP20711 480 aa10.31□□□□□ -0.76
RFPL3-201ENST00000249007 MDKP21741 143 aaPredicted RBP10.31□□□□□ -0.76
RFPL3-201ENST00000249007 LCN1P31025 176 aa10.31□□□□□ -0.76
RFPL3-201ENST00000249007 TALDO1P37837 337 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms