RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 SPIN2AQ99865 258 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 SPIN2BQ9BPZ2 258 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 CD207Q9UJ71 328 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 HBQ1P09105 142 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 PXNP49023 591 aaPredicted RBP18.34■□□□□ 0.53
SOX4-201ENST00000244745 CNN3Q15417 329 aaKnown RBP18.34■□□□□ 0.53
SOX4-201ENST00000244745 TOR2AQ5JU69 321 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 LINC01599Q8WXQ3 324 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 PRSS44E7EML9 344 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 CSF3P09919 207 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 YIF1BQ5BJH7 314 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 CROCCQ5TZA2 2017 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 PLCXD3Q63HM9 321 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 TMEM200AQ86VY9 491 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 LRRC18Q8N456 261 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 ADAM18Q9Y3Q7 739 aa18.34■□□□□ 0.53
SOX4-201ENST00000244745 STMND1H3BQB6 276 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 SURF4O15260 269 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 IGLV3-27P01718 113 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 IGHG1P01857 330 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 CBR1P16152 277 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 HOXB9P17482 250 aaPredicted RBP18.33■□□□□ 0.53
SOX4-201ENST00000244745 MELKQ14680 651 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 TMEM31Q5JXX7 168 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 MCOLN1Q9GZU1 580 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 CUTCQ9NTM9 273 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 CHST2Q9Y4C5 530 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 LRIT2A6NDA9 550 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 CD79AP11912 226 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 BCL2A1Q16548 175 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 TMEM52BQ4KMG9 183 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 ZNF511Q8NB15 262 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 POFUT1Q9H488 388 aa18.33■□□□□ 0.53
SOX4-201ENST00000244745 PAPPAQ13219 1627 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 NUDT1P36639 197 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 CX3CR1P49238 355 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 EXOSC6Q5RKV6 272 aaKnown RBP18.33■□□□□ 0.52
SOX4-201ENST00000244745 OR6F1Q8NGZ6 308 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 CHRDQ9H2X0 955 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 NHSQ6T4R5 1651 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 USP54Q70EL1 1684 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 K7EPK0 472 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 DPM1O60762 260 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 ADRB1P08588 477 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 TM4SF4P48230 202 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 POLR2HP52434 150 aaKnown RBP18.33■□□□□ 0.52
SOX4-201ENST00000244745 CLDN20P56880 219 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 MRPL21Q7Z2W9 205 aaKnown RBP18.33■□□□□ 0.52
SOX4-201ENST00000244745 FAM122BQ7Z309 247 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 FAM71E2Q8N5Q1 922 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 OR51B6Q9H340 312 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 PIGBOS1A0A0B4J2F0 54 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 ATP1B1P05026 303 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 CCR9P51686 369 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 EEF1A2Q05639 463 aaKnown RBP18.33■□□□□ 0.52
SOX4-201ENST00000244745 PTOV1Q86YD1 416 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 LIN37Q96GY3 246 aaPredicted RBP18.33■□□□□ 0.52
SOX4-201ENST00000244745 OPALINQ96PE5 141 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 HCFC2Q9Y5Z7 792 aa18.33■□□□□ 0.52
SOX4-201ENST00000244745 H3BNC9 293 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 UTS2O95399 124 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 NDUFA6P56556 154 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 AANATQ16613 207 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 CTF1Q16619 201 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 HIST2H3PS2Q5TEC6 136 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 PAPD4Q6PIY7 484 aaKnown RBP18.32■□□□□ 0.52
SOX4-201ENST00000244745 ZBP1Q9H171 429 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 ETV7Q9Y603 341 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 CCDC163A0A0D9SF12 145 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 DBHP09172 617 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 CD1EP15812 388 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 LIM2P55344 173 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 STEAP1BQ6NZ63 245 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 CYHR1Q6ZMK1 362 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 RTL10Q7L3V2 364 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 ASPDHA6ND91 283 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 EPHA2P29317 976 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 EXOSC2Q13868 293 aaKnown RBP18.32■□□□□ 0.52
SOX4-201ENST00000244745 GPR155Q7Z3F1 870 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 TGM1P22735 817 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 MED25Q71SY5 747 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 TCTN2Q96GX1 697 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 MAP6Q96JE9 813 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 PDCD1LG2Q9BQ51 273 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 SLC6A17Q9H1V8 727 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 SMCO4Q9NRQ5 59 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 EMC9Q9Y3B6 208 aa18.32■□□□□ 0.52
SOX4-201ENST00000244745 EPHA5P54756 1037 aa18.31■□□□□ 0.52
SOX4-201ENST00000244745 EEF1A1P68104 462 aaKnown RBP18.31■□□□□ 0.52
SOX4-201ENST00000244745 P2RY10O00398 339 aa18.31■□□□□ 0.52
SOX4-201ENST00000244745 FAHD1Q6P587 224 aa18.31■□□□□ 0.52
SOX4-201ENST00000244745 OR56B2PQ8NGI1 322 aa18.31■□□□□ 0.52
SOX4-201ENST00000244745 ARL3P36405 182 aa18.31■□□□□ 0.52
SOX4-201ENST00000244745 SEC61A1P61619 476 aaKnown RBP18.31■□□□□ 0.52
SOX4-201ENST00000244745 MOB3CQ70IA8 216 aa18.31■□□□□ 0.52
SOX4-201ENST00000244745 CMIPQ8IY22 773 aa18.31■□□□□ 0.52
SOX4-201ENST00000244745 VN1R3Q9BXE9 311 aa18.31■□□□□ 0.52
SOX4-201ENST00000244745 NCDNQ9UBB6 729 aa18.31■□□□□ 0.52
SOX4-201ENST00000244745 CDK5RAP2Q96SN8 1893 aa18.31■□□□□ 0.52
SOX4-201ENST00000244745 PRAMEF27A3QJZ7 478 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms