RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CBFBQ13951 182 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 HSPB2Q16082 182 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 LIPNQ5VXI9 398 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 DEFB123Q8N688 67 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 OR4D9Q8NGE8 314 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 RGP1Q92546 391 aaPredicted RBP14.66□□□□□ -0.06
UBE3D-201ENST00000237186 YIPF5Q969M3 257 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 MRI1Q9BV20 369 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 PTDSS2Q9BVG9 487 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 WDR76Q9H967 626 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 SRA1Q9HD15 236 aaKnown RBP14.66□□□□□ -0.06
UBE3D-201ENST00000237186 RANGRFQ9HD47 186 aaPredicted RBP14.66□□□□□ -0.06
UBE3D-201ENST00000237186 BRD7Q9NPI1 651 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 PRDM6Q9NQX0 595 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 KLHDC2Q9Y2U9 406 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 CACNG2Q9Y698 323 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 IGLV3-12A0A075B6K2 115 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 OR6C70A6NIJ9 312 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 A8MV72 311 aaPredicted RBP14.65□□□□□ -0.06
UBE3D-201ENST00000237186 K7ESF4 209 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 AIPO00170 330 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 ADAM10O14672 748 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 EEF1E1O43324 174 aaKnown RBP14.65□□□□□ -0.06
UBE3D-201ENST00000237186 GSTZ1O43708 216 aaPredicted RBP14.65□□□□□ -0.06
UBE3D-201ENST00000237186 SERPINI2O75830 405 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 GSTT2P0CG29 244 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 GSTT2BP0CG30 244 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 ALOX5APP20292 161 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 ALKBH1Q13686 389 aaKnown RBP14.65□□□□□ -0.06
UBE3D-201ENST00000237186 SHBQ15464 509 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 SGCBQ16585 318 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 NDUFA5Q16718 116 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 C1orf189Q5VU69 101 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 BICRALQ6AI39 1079 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 RHBDD2Q6NTF9 364 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 MAMDC2Q7Z304 686 aaPredicted RBP14.65□□□□□ -0.06
UBE3D-201ENST00000237186 FAM220AQ7Z4H9 259 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 NOXA1Q86UR1 476 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 KLHL15Q96M94 604 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 DERL3Q96Q80 235 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 FYTTD1Q96QD9 318 aaKnown RBP14.65□□□□□ -0.06
UBE3D-201ENST00000237186 GFI1Q99684 422 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 ANKRD10Q9NXR5 420 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 SRPK3Q9UPE1 567 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 RBMX2Q9Y388 322 aaKnown RBP14.65□□□□□ -0.06
UBE3D-201ENST00000237186 TMEM14AQ9Y6G1 99 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 ARPC4-TTLL3A0A0A6YYG9 625 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 A0A1B0GVC2 190 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 A6NIN4 97 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 IFITM5A6NNB3 132 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 ARSBP15848 533 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 PNLIPP16233 465 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 POLR2HP52434 150 aaKnown RBP14.65□□□□□ -0.06
UBE3D-201ENST00000237186 UBE2NLQ5JXB2 153 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 FAM69AQ5T7M9 428 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 COX15Q7KZN9 410 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 GPR119Q8TDV5 335 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 DMRTB1Q96MA1 342 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 C7orf50Q9BRJ6 194 aaKnown RBP14.65□□□□□ -0.06
UBE3D-201ENST00000237186 SEMA4CQ9C0C4 833 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 SLC22A11Q9NSA0 550 aa14.65□□□□□ -0.06
UBE3D-201ENST00000237186 TRBV5-5A0A0J9YX44 114 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 PHYHO14832 338 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 ITGA10O75578 1167 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 DXOO77932 396 aaKnown RBP14.64□□□□□ -0.07
UBE3D-201ENST00000237186 YES1P07947 543 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 EVI2BP34910 448 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 BTCP35070 178 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 CENPAP49450 140 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 Q499Y3 187 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 C1QL3Q5VWW1 255 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 TMEM71Q6P5X7 295 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 C5orf46Q6UWT4 87 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 ASB18Q6ZVZ8 466 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 GRINAQ7Z429 371 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 ADGRG3Q86Y34 549 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 MISPQ8IVT2 679 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 DTX3Q8N9I9 347 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 STK35Q8TDR2 534 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 ELF4Q99607 663 aaPredicted RBP14.64□□□□□ -0.07
UBE3D-201ENST00000237186 NUDT22Q9BRQ3 303 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 FRRS1LQ9P0K9 344 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 LAMP5Q9UJQ1 280 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 FKBP7Q9Y680 259 aa14.64□□□□□ -0.07
UBE3D-201ENST00000237186 ACOD1A6NK06 481 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 A8MVM7 634 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 PSMD9O00233 223 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 SLC25A12O75746 678 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 ZNF432O94892 652 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 OR8G3PP0DMU2 310 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 PRKCAP17252 672 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 MAPK3P27361 379 aaPredicted RBP14.63□□□□□ -0.07
UBE3D-201ENST00000237186 GRPRP30550 384 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 CXCL12P48061 93 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 RRAS2P62070 204 aaPredicted RBP14.63□□□□□ -0.07
UBE3D-201ENST00000237186 CDK10Q15131 360 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 NTRK2Q16620 822 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 FAM199XQ6PEV8 388 aaPredicted RBP14.63□□□□□ -0.07
UBE3D-201ENST00000237186 RABEPKQ7Z6M1 372 aa14.63□□□□□ -0.07
UBE3D-201ENST00000237186 PRSS58Q8IYP2 241 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms