RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 LATO43561 262 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 MGMTP16455 207 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 TYRP1P17643 537 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 CTNNB1P35222 781 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 SIRPAP78324 504 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 TRAM1Q15629 374 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 AVPI1Q5T686 147 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 BAIAP2L2Q6UXY1 529 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 FAM219AQ8IW50 185 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 BEST3Q8N1M1 668 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 SLC16A11Q8NCK7 471 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 GRHL3Q8TE85 626 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 EDARADDQ8WWZ3 215 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 HS6ST2Q96MM7 605 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 POFUT1Q9H488 388 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 MEPEQ9NQ76 525 aaPredicted RBP12.89□□□□□ -0.35
SF1-201ENST00000227503 CLDND1Q9NY35 253 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 MIOXQ9UGB7 285 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 REV3LO60673 3130 aa12.89□□□□□ -0.35
SF1-201ENST00000227503 DOCK9Q9BZ29 2069 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 LOC100509620A0A075B734 347 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 A0A1W2PPE3 182 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 KANTRA0A1W2PQU2 76 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 ZNF705EA8MWA4 302 aaPredicted RBP12.88□□□□□ -0.35
SF1-201ENST00000227503 TXNL1O43396 289 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 RNGTTO60942 597 aaKnown RBP12.88□□□□□ -0.35
SF1-201ENST00000227503 UBBP0CG47 229 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 UBCP0CG48 685 aaKnown RBP12.88□□□□□ -0.35
SF1-201ENST00000227503 GTF2F2P13984 249 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 HTR2AP28223 471 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 DRD3P35462 400 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 EFNB2P52799 333 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 RPS27AP62979 156 aaKnown RBP12.88□□□□□ -0.35
SF1-201ENST00000227503 UBA52P62987 128 aaKnown RBP12.88□□□□□ -0.35
SF1-201ENST00000227503 SNTB1Q13884 538 aaKnown RBP12.88□□□□□ -0.35
SF1-201ENST00000227503 FAM109BQ6ICB4 259 aaPredicted RBP12.88□□□□□ -0.35
SF1-201ENST00000227503 MOAP1Q96BY2 351 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 PRSS27Q9BQR3 290 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 TREM1Q9NP99 234 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 SLC22A7Q9Y694 548 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 FAM86C2PA6NEL3 165 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 RFPL4AA6NLU0 287 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 FAM25EA8MYX2 175 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 RFPL4AL1F8VTS6 287 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 SCAMP1O15126 338 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 MAS1P04201 325 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 CD3DP04234 171 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 CSN2P05814 226 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 FBXO45P0C2W1 286 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 PTAFRP25105 342 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 TAS2R43P59537 309 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 NANOS3P60323 173 aaKnown RBP12.88□□□□□ -0.35
SF1-201ENST00000227503 SLC48A1Q6P1K1 146 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 RAB42Q8N4Z0 105 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 OR2L8Q8NGY9 312 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 SUSD6Q92537 303 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 RGP1Q92546 391 aaPredicted RBP12.88□□□□□ -0.35
SF1-201ENST00000227503 NR4A3Q92570 626 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 CDS1Q92903 461 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 MRPL48Q96GC5 212 aaKnown RBP12.88□□□□□ -0.35
SF1-201ENST00000227503 MRPS30Q9NP92 439 aaKnown RBP12.88□□□□□ -0.35
SF1-201ENST00000227503 MPDZO75970 2070 aa12.88□□□□□ -0.35
SF1-201ENST00000227503 C4orf47A7E2U8 309 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 ACOT7O00154 380 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 EMC8O43402 210 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 CERS1P27544 350 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 ZNF836Q6ZNA1 936 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 GLB1L2Q8IW92 636 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 NUP43Q8NFH3 380 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 OR52E2Q8NGJ4 325 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 CMC2Q9NRP2 79 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 ZNF275Q9NSD4 429 aaPredicted RBP12.87□□□□□ -0.35
SF1-201ENST00000227503 KLHL28Q9NXS3 571 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 CACNA1IQ9P0X4 2223 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 CPED1A4D0V7 1026 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 RIIAD1A6NNX1 92 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 PRR32B1ATL7 298 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 CSNK2A2P19784 350 aaPredicted RBP12.87□□□□□ -0.35
SF1-201ENST00000227503 HABP2Q14520 560 aaPredicted RBP12.87□□□□□ -0.35
SF1-201ENST00000227503 CCDC157Q569K6 752 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 FAM78AQ5JUQ0 283 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 SPRED2Q7Z698 418 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 TMPRSS12Q86WS5 348 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 CACUL1Q86Y37 369 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 SPAG16Q8N0X2 631 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 LNX2Q8N448 690 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 TEX19Q8NA77 164 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 STEAP2Q8NFT2 490 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 OR2L5Q8NG80 312 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 SLC35A4Q96G79 324 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 ZNF681Q96N22 645 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 OR5H14A6NHG9 310 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 M0QYG6 137 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 EIF1BO60739 113 aaKnown RBP12.87□□□□□ -0.35
SF1-201ENST00000227503 ADRA2CP18825 462 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 EIF1P41567 113 aaKnown RBP12.87□□□□□ -0.35
SF1-201ENST00000227503 PPT1P50897 306 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 ARFIP1P53367 373 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 PNLIPRP2P54317 469 aa12.87□□□□□ -0.35
SF1-201ENST00000227503 CEBPEQ15744 281 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms