RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 CSN1S1P47710 185 aa13.79□□□□□ -0.2
UBR5-201ENST00000220959 ZNF691Q5VV52 312 aa13.79□□□□□ -0.2
UBR5-201ENST00000220959 Q6ZRG5 221 aa13.79□□□□□ -0.2
UBR5-201ENST00000220959 ZNF384Q8TF68 577 aa13.79□□□□□ -0.2
UBR5-201ENST00000220959 ERVMER34-1Q9H9K5 563 aa13.79□□□□□ -0.2
UBR5-201ENST00000220959 ACSS1Q9NUB1 689 aaPredicted RBP13.79□□□□□ -0.2
UBR5-201ENST00000220959 RAP2BP61225 183 aa13.79□□□□□ -0.2
UBR5-201ENST00000220959 LACC1Q8IV20 430 aa13.79□□□□□ -0.2
UBR5-201ENST00000220959 ZC3H3Q8IXZ2 948 aaKnown RBP13.79□□□□□ -0.2
UBR5-201ENST00000220959 SLC30A3Q99726 388 aa13.79□□□□□ -0.2
UBR5-201ENST00000220959 NIPAL2Q9H841 368 aa13.79□□□□□ -0.2
UBR5-201ENST00000220959 J3KTA2 159 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 DEGS1O15121 323 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 NCR1O76036 304 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 SYPL1Q16563 259 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 DNAJC5GQ8N7S2 189 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 APH1AQ96BI3 265 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 C1GALT1Q9NS00 363 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 TMEM221A6NGB7 291 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 AGPAT4Q9NRZ5 378 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 AQP7O14520 342 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 OR2T7P0C7T2 308 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 NDUFB7P17568 137 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 SLC1A3P43003 542 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 PSMB3P49720 205 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 RIMS4Q9H426 269 aaPredicted RBP13.78□□□□□ -0.2
UBR5-201ENST00000220959 RFXAPO00287 272 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 DOK2O60496 412 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 AIFM1O95831 613 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 CSNK1EP49674 416 aaKnown RBP13.78□□□□□ -0.2
UBR5-201ENST00000220959 GAREM2Q75VX8 874 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 METTL4Q8N3J2 472 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 ZNF486Q96H40 463 aaPredicted RBP13.78□□□□□ -0.2
UBR5-201ENST00000220959 LCORQ96JN0 433 aaPredicted RBP13.78□□□□□ -0.2
UBR5-201ENST00000220959 GPX3P22352 226 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 HTR2CP28335 458 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 CD300LGQ6UXG3 332 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 CDCP1Q9H5V8 836 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 SDK1Q7Z5N4 2213 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 GPRIN2O60269 458 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 TGM1P22735 817 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 INHBCP55103 352 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 TSPAN31Q12999 210 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 EBPQ15125 230 aaKnown RBP13.78□□□□□ -0.2
UBR5-201ENST00000220959 ZNF789Q5FWF6 425 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 TMEM104Q8NE00 496 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 ARPC5LQ9BPX5 153 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 NUDT9Q9BW91 350 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 GALNT9Q9HCQ5 603 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 LOXHD1Q8IVV2 1947 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 DRGXA6NNA5 263 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 EIF1P41567 113 aaKnown RBP13.78□□□□□ -0.2
UBR5-201ENST00000220959 FAM122AQ96E09 287 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 SEMA6CQ9H3T2 930 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 FRMPD2BQ6IN97 320 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 SCD5Q86SK9 330 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 KDM8Q8N371 416 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 TMEM40Q8WWA1 233 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 MED20Q9H944 212 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 PURGQ9UJV8 347 aaKnown RBP13.78□□□□□ -0.2
UBR5-201ENST00000220959 PIGLQ9Y2B2 252 aa13.78□□□□□ -0.2
UBR5-201ENST00000220959 LRP5LA4QPB2 252 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 G3V3Y1 287 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 YIF1AO95070 293 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 PPP3CBP16298 524 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 ECI1P42126 302 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 NKAIN2Q5VXU1 208 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 REEP6Q96HR9 211 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 TMEM43Q9BTV4 400 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 GAREM1Q9H706 876 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 TRAV36DV7A0A075B6V5 113 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 HBA1P69905 142 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 ANKLE1Q8NAG6 615 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 OR5D18Q8NGL1 313 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 DCLRE1CQ96SD1 692 aaKnown RBP13.77□□□□□ -0.2
UBR5-201ENST00000220959 COL14A1Q05707 1796 aaKnown RBP13.77□□□□□ -0.2
UBR5-201ENST00000220959 SERINC4A6NH21 518 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 SLC31A2O15432 143 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 AOAHP28039 575 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 CTSCP53634 463 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 PAPD4Q6PIY7 484 aaKnown RBP13.77□□□□□ -0.2
UBR5-201ENST00000220959 TMEM217Q8N7C4 229 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 KCNG3Q8TAE7 436 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 ALG12Q9BV10 488 aa13.77□□□□□ -0.2
UBR5-201ENST00000220959 LRIT2A6NDA9 550 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 HLA-HP01893 362 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 RPA2P15927 270 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 CTRB1P17538 263 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 GABRA5P31644 462 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 CTRB2Q6GPI1 263 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 LYPD4Q6UWN0 246 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 COL1A1P02452 1464 aaPredicted RBP13.77□□□□□ -0.21
UBR5-201ENST00000220959 ZCWPW2A0A1B0GU75 182 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 RAB19A4D1S5 217 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 GPR171O14626 319 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 PRRG2O14669 202 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 CYBAP13498 195 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 SLC7A9P82251 487 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 ARHGAP11BQ3KRB8 267 aa13.77□□□□□ -0.21
UBR5-201ENST00000220959 SYT9Q86SS6 491 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms