RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 MFRPQ9BY79 579 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 LANCL2Q9NS86 450 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 ACOD1A6NK06 481 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 PLPP1O14494 284 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 DOK2O60496 412 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 ADAM23O75077 832 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 PTAFRP25105 342 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 ARL11Q969Q4 196 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 ELMOD3Q96FG2 381 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 NUP98P52948 1817 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 LINC01565O15544 149 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 HOXB5P09067 269 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 UBCP0CG48 685 aaKnown RBP17.47■□□□□ 0.39
SMPD3-201ENST00000219334 BLVRBP30043 206 aaPredicted RBP17.47■□□□□ 0.39
SMPD3-201ENST00000219334 GRB2P62993 217 aaKnown RBP17.47■□□□□ 0.39
SMPD3-201ENST00000219334 TNK1Q13470 666 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 CRMP1Q14194 572 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 HACD4Q5VWC8 232 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 ETFBKMTQ8IXQ9 262 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 OR6T1Q8NGN1 323 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 SGPP1Q9BX95 441 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 MICAL3Q7RTP6 2002 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 ALDH3B1P43353 468 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 MYBPHQ13203 477 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 ZMAT1Q5H9K5 638 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 LHX8Q68G74 356 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 ELP2Q6IA86 826 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 GDPD3Q7L5L3 318 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 SLC43A2Q8N370 569 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 SLC15A4Q8N697 577 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 TMEM106AQ96A25 262 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 ZPBPQ9BS86 351 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 DUSP22Q9NRW4 184 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 NDUFAF4Q9P032 175 aa17.47■□□□□ 0.39
SMPD3-201ENST00000219334 H7C1Q1 480 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 SPINT2O43291 252 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 AKR7A3O95154 331 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 NXNL2Q5VZ03 156 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 NMNAT2Q9BZQ4 307 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 GLTPQ9NZD2 209 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 C4orf47A7E2U8 309 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 NOTOA8MTQ0 251 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 P2RY10O00398 339 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 IL1AP01583 271 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 IGHV3-9P01782 118 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 TMEM255BQ8WV15 326 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 DAZAP1Q96EP5 407 aaKnown RBP17.46■□□□□ 0.39
SMPD3-201ENST00000219334 BARHL1Q9BZE3 327 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 MFFQ9GZY8 342 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 NOX3Q9HBY0 568 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 PRELID3BQ9Y3B1 194 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 TOPAZ1Q8N9V7 1692 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 A0A0U1RQK1 487 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 T-ENOLP0DO92 83 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 CAPZBP47756 277 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 PPIAP62937 165 aaKnown RBP17.46■□□□□ 0.39
SMPD3-201ENST00000219334 Q499Y3 187 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 BAHD1Q8TBE0 780 aaPredicted RBP17.46■□□□□ 0.39
SMPD3-201ENST00000219334 STK35Q8TDR2 534 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 P2RY12Q9H244 342 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 FKRPQ9H9S5 495 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 OR51B4Q9Y5P0 310 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 A6NIN4 97 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 GRPP07492 148 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 HOXA1P49639 335 aaPredicted RBP17.46■□□□□ 0.39
SMPD3-201ENST00000219334 EMX1Q04741 257 aaPredicted RBP17.46■□□□□ 0.39
SMPD3-201ENST00000219334 UBE2NLQ5JXB2 153 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 ZNF529Q6P280 563 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 ZNF836Q6ZNA1 936 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 PROCRQ9UNN8 238 aa17.46■□□□□ 0.39
SMPD3-201ENST00000219334 RGPD2P0DJD1 1756 aa17.46■□□□□ 0.38
SMPD3-201ENST00000219334 TRGV8A0A0C4DH27 118 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 CCDC163A0A0D9SF12 145 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 OR6C76A6NM76 312 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 SPDEFO95238 335 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 NFYAP23511 347 aaPredicted RBP17.45■□□□□ 0.38
SMPD3-201ENST00000219334 PTPN6P29350 595 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 PPP2CBP62714 309 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 PPP2CAP67775 309 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 VWA2Q5GFL6 755 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 SLC46A3Q7Z3Q1 461 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 CPEB2Q7Z5Q1 589 aaKnown RBP17.45■□□□□ 0.38
SMPD3-201ENST00000219334 OR4A16Q8NH70 328 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 ZNF583Q96ND8 569 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 ASF1BQ9NVP2 202 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 WBP1LQ9NX94 342 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 NDRG3Q9UGV2 375 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 SOCS6O14544 535 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 PLRG1O43660 514 aaKnown RBP17.45■□□□□ 0.38
SMPD3-201ENST00000219334 CD22P20273 847 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 TAS2R30P59541 319 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 MEP1BQ16820 701 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 LPCAT3Q6P1A2 487 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 SLC22A24Q8N4F4 322 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 OR51J1Q9H342 316 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 CHRNA9Q9UGM1 479 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 MYH3P11055 1940 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 SELEP16581 610 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 CPT2P23786 658 aa17.45■□□□□ 0.38
SMPD3-201ENST00000219334 GCAP28676 217 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms