RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 PTP4A3O75365 173 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 ARL6IP5O75915 188 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 MPC2O95563 127 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 PSMA6P60900 246 aaKnown RBP13.76□□□□□ -0.21
EFNB1-201ENST00000204961 GFOD2Q3B7J2 385 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 VWA2Q5GFL6 755 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 MARCH3Q86UD3 253 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 KIAA1143Q96AT1 154 aaPredicted RBP13.76□□□□□ -0.21
EFNB1-201ENST00000204961 RTN4RQ9BZR6 473 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 PITHD1Q9GZP4 211 aaPredicted RBP13.76□□□□□ -0.21
EFNB1-201ENST00000204961 TMEM185BQ9H7F4 350 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 MED17Q9NVC6 651 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 CGGBP1Q9UFW8 167 aaPredicted RBP13.76□□□□□ -0.21
EFNB1-201ENST00000204961 C17orf105B2RV13 164 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 SHISA8B8ZZ34 492 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 H0YIG0 161 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 LYPD3O95274 346 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 AGR2O95994 175 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 MGAT2Q10469 447 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 PCGF3Q3KNV8 242 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 SCGB2B2Q4G0G5 96 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 FAM69BQ5VUD6 431 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 RNLSQ5VYX0 342 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 ARHGAP11AQ6P4F7 1023 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 TMEM205Q6UW68 189 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 OR5M1Q8NGP8 315 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 BAHD1Q8TBE0 780 aaPredicted RBP13.76□□□□□ -0.21
EFNB1-201ENST00000204961 ACOT12Q8WYK0 555 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 GHITMQ9H3K2 345 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 HRASLSQ9HDD0 168 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 DUSP22Q9NRW4 184 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 KCNG2Q9UJ96 466 aa13.76□□□□□ -0.21
EFNB1-201ENST00000204961 A0A1B0GVI7 797 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 OR6A2O95222 327 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 RAB14P61106 215 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 GSG1Q2KHT4 349 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 ALG10Q5BKT4 473 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 TMPRSS11FQ6ZWK6 438 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 NLRC3Q7RTR2 1065 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 BCORP1Q8N888 145 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 FLVCR1-AS1Q8TAF5 88 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 LMX1AQ8TE12 382 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 SMIM19Q96E16 107 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 OR10A5Q9H207 317 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 CENPMQ9NSP4 180 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 DOCK7Q96N67 2140 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 SEMA4FO95754 770 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 LCN1P31025 176 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 TMEM44Q2T9K0 475 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 TCTE1Q5JU00 501 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 ARHGAP40Q5TG30 622 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 ULK3Q6PHR2 472 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 FAM220AQ7Z4H9 259 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 MS4A15Q8N5U1 240 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 CYYR1Q96J86 154 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 SPACA5Q96QH8 159 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 NXF5Q9H1B4 397 aaKnown RBP13.75□□□□□ -0.21
EFNB1-201ENST00000204961 GRHPRQ9UBQ7 328 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 NUP210Q8TEM1 1887 aaPredicted RBP13.75□□□□□ -0.21
EFNB1-201ENST00000204961 J3QRE1 110 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 M0QYG6 137 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 M0R233 179 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 ZP1P60852 638 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 RPS11P62280 158 aaKnown RBP eCLIP13.75□□□□□ -0.21
EFNB1-201ENST00000204961 FHL5Q5TD97 284 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 CORO6Q6QEF8 472 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 CHRDL2Q6WN34 429 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 ZNF782Q6ZMW2 699 aaPredicted RBP13.75□□□□□ -0.21
EFNB1-201ENST00000204961 LINC00346Q8IVM7 164 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 ZBTB44Q8NCP5 570 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 SLC38A3Q99624 504 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 GFI1Q99684 422 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 PTDSS2Q9BVG9 487 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 B3GNT2Q9NY97 397 aa13.75□□□□□ -0.21
EFNB1-201ENST00000204961 UBL3O95164 117 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 TACR3P29371 465 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 CCR9P51686 369 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 NR0B1P51843 470 aaKnown RBP13.74□□□□□ -0.21
EFNB1-201ENST00000204961 C2orf68Q2NKX9 166 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 C4orf46Q504U0 113 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 NPEPL1Q8NDH3 523 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 OR5AK2Q8NH90 309 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 TNFAIP8L1Q8WVP5 186 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 RGP1Q92546 391 aaPredicted RBP13.74□□□□□ -0.21
EFNB1-201ENST00000204961 AHCYL2Q96HN2 611 aaKnown RBP13.74□□□□□ -0.21
EFNB1-201ENST00000204961 NUDT22Q9BRQ3 303 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 B3GNT4Q9C0J1 378 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 CHST6Q9GZX3 395 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 ISYNA1Q9NPH2 558 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 NRIP3Q9NQ35 241 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 V9GY05 133 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 GVINP1Q7Z2Y8 2422 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 AKR7A3O95154 331 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 SPDEFO95238 335 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 TNFP01375 233 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 IGFBP4P22692 258 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 TMEM65Q6PI78 240 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 LRFN4Q6PJG9 635 aa13.74□□□□□ -0.21
EFNB1-201ENST00000204961 RELL2Q8NC24 303 aaPredicted RBP13.74□□□□□ -0.21
EFNB1-201ENST00000204961 GALNT6Q8NCL4 622 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms