RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Lin28bQ45KJ6 247 aaKnown RBP9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Znf488Q5HZG9 337 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Frg2f1Q6P3A2 227 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr198Q7TS40 306 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Sez6Q7TSK2 991 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Cldn34b3Q80ZS5 209 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Slc25a45Q8CFJ7 288 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr769Q8K501 312 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Sec14l4Q8R0F9 403 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr518Q8VEW1 333 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Prdm5Q9CXE0 599 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 C1qtnf2Q9D8U4 294 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Upf1Q9EPU0 1124 aaKnown RBP9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Asah1Q9WV54 394 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Minpp1Q9Z2L6 481 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gm4924A0A1B0GR71 966 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 CatsperdE9Q9F6 805 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 OtpO09113 325 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Nipsnap1O55125 284 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 TpbpaP13438 124 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Cd48P18181 240 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Aqp2P56402 271 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Adamts15P59384 950 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gch1Q05915 241 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Fam109bQ14B98 259 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 UradQ283N4 178 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 1700012B07RikQ3V0S8 276 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gcnt7Q3V3K7 433 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Otop1Q80VM9 600 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Pou6f2Q8BJI4 691 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Kbtbd11Q8BNW9 633 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 SinhcafQ8C8M1 221 aaKnown RBP9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Rnf222Q8CEF8 211 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Dnajc22Q8CHS2 339 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Rfwd3Q8CIK8 774 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr1176Q8VG40 315 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Tomm34Q9CYG7 309 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Dcbld1Q9D4J3 503 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Lypd6bQ9D7F2 191 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Dnajb8Q9QYI7 227 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Bmp10Q9R229 421 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 SptbP15508 2128 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Kntc1Q8C3Y4 2207 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr560A0A1B0GSU5 314 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 AI182371A2AS37 356 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Fbxw24E9PXM9 466 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr420E9Q4G0 321 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Irs3O54718 495 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Fcgr3P08508 261 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Tbx4P70325 552 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Cnn2Q08093 305 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Zfp987Q32P14 633 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Nxpe2Q3U095 558 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Grhl3Q5FWH3 603 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Ppp5cQ60676 499 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 ShhQ62226 437 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Pcp4l1Q6W8Q3 68 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Adam30Q811Q3 732 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Pamr1Q8BU25 720 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Tmem222Q8BVA2 208 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Slc43a2Q8CGA3 568 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Eps8l3Q91WL0 600 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Zfp810Q99K45 461 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Nmrk2Q9D7C9 195 aa9.01□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 AgmatA2AS89 358 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Slc38a6G3UVW3 457 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Vmn1r57K7N731 310 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Dok2O70469 412 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Hoxb6P09023 224 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Tacr1P30548 407 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Rps11P62281 158 aaKnown RBP9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Rps15P62843 145 aaKnown RBP9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Slc35f3Q1LZI2 421 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Slc2a6Q3UDF0 497 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 H2-Eb2Q3UUV9 287 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 FcrlbQ5DRQ8 427 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Fut10Q5F2L2 481 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Taar7dQ5QD10 358 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Lcn3Q62471 182 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Hsh2dQ6VYH9 334 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Tmed3Q78IS1 221 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr374Q7TRY0 313 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Agbl3Q8CDP0 1006 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Nkd2Q8VE28 461 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Clec2fQ8VI21 196 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 AspnQ99MQ4 373 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Slc35a4Q9D321 324 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Dennd6bQ9D9V7 585 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Igkv6-29A0A0G2JEI6 115 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Igkv12-44A0A140T8M2 115 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr115B2RTB9 312 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gm21876F6XK35 94 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Ppt2O35448 302 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 UgdhO70475 493 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Il13P20109 131 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Arf3P61205 181 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Snai2P97469 269 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Fbxw16Q497Z0 464 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Sema4cQ64151 834 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 RgmaQ6PCX7 454 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms