RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Fam71f1Q3UZD7 341 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Mapk3Q63844 380 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Pqlc3Q8C6U2 202 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn1r43Q8VIC9 329 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Lypd2Q9DD23 127 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Hsd17b11Q9EQ06 298 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Prss16Q9QXE5 509 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Nipsnap2O55126 281 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ap2s1P62743 142 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 BidP70444 195 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Sf3b4Q8QZY9 424 aaKnown RBP10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Syt17Q920M7 470 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Q99K99 313 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tmem216Q9CQC4 141 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Nudt22Q9DD16 308 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 ClcnkaQ9WUB7 687 aa10.97□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Col9a3A2ACT7 680 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Vmn1r177E9PXM3 309 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Wnt9bO35468 359 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Hsd17b12O70503 312 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Crtc2Q3U182 692 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cnep1r1Q3UJ81 125 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Meig1Q61845 88 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ppp1r14bQ62084 147 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 HepacamQ640R3 418 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Galnt2Q6PB93 570 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Kmt5cQ6Q783 468 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Q80Y39 304 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Edem2Q8BJT9 577 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc35f4Q8BZK4 485 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 SinhcafQ8C8M1 221 aaKnown RBP10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 LhppQ9D7I5 270 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Prl8a8Q9DAS4 241 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc25a18Q9DB41 320 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Thsd7bQ6P4U0 1607 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Trbv20A0A0B4J1H5 111 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Lao1B1ARV3 523 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Zfp964B2RR88 472 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gstm3P19639 218 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ccr1l1P51676 356 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 FapP97321 761 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ccdc177Q3UHB8 706 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Prss38Q3UKY7 322 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Rgs7bpQ8BQP9 257 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Dcdc2cQ9D1B8 347 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 SigirrQ9JLZ8 409 aa10.96□□□□□ -0.65
Pcif1-201ENSMUST00000041643 SparcP07214 302 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cpt2P52825 658 aaKnown RBP10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tas2r3Q7TQA7 316 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Kctd9Q80UN1 339 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cpeb2Q812E0 521 aaKnown RBP10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slc30a8Q8BGG0 367 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Mfsd8Q8BH31 519 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr202Q8VGQ3 307 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gorasp1Q91X51 446 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ccdc107Q9DCC3 242 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Bmp10Q9R229 421 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Tmem14aP56983 99 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 VegfdP97946 358 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Mccc2Q3ULD5 563 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 SypQ62277 314 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Camk2dQ6PHZ2 499 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Lcn10Q810Z1 182 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Oas1hQ8VI97 369 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cyc1Q9D0M3 325 aaKnown RBP10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 PtgesQ9JM51 153 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rnaset2aC0HKG5 259 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rnaset2bC0HKG6 259 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Dbx2F8VQH7 377 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Phox2bO35690 314 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 IghmP01872 454 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Klk1b5P15945 261 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 InhbbQ04999 411 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Secisbp2Q3U1C4 858 aaKnown RBP10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr11Q60890 313 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 GldnQ8BMF8 549 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Slc24a5Q8C261 501 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Rad1Q9QWZ1 280 aa10.96□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Vmn1r68E9Q0V3 319 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Gm2035J3QP87 144 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Prl8a2O54832 240 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Cdk1P11440 297 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 VipP32648 170 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Thoc7Q7TMY4 204 aaKnown RBP10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Hmbox1Q8BJA3 419 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Asb12Q9D738 308 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Lpar3Q9EQ31 354 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Arpc3Q9JM76 178 aaKnown RBP10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Opn4Q9QXZ9 521 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Psma1Q9R1P4 263 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Ppp1r17Q9Z2E4 159 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Olfr1018A2ASV3 311 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 PtprhE9Q0N2 971 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Zfp275G3X904 499 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Prss48Q14B25 312 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Bahd1Q497V6 772 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Morn4Q6PGF2 146 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Abhd16bQ80YU0 474 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 Txnl4bQ8BUH1 149 aa10.95□□□□□ -0.66
Pcif1-201ENSMUST00000041643 ZxdcQ8C8V1 858 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms