RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Gm5916G5E8W5 102 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Olfr190K7N5T5 307 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Gm10354K7N6A0 256 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 OmdO35103 423 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Tcl1aP56280 116 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Nudt2P56380 147 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Rac1P63001 192 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Rps5P97461 204 aaKnown RBP13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Shc1P98083 579 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Gpat2Q14DK4 801 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Fbxo31Q3TQF0 507 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Gm6899Q3USS0 134 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Slc44a5Q5RJI2 710 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Olfr744Q7TRM0 323 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Olfr645Q7TRQ1 315 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Hs6st2Q80UW0 612 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Slc36a2Q8BHK3 478 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Znf787Q8BIF9 381 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Prpf18Q8BM39 342 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Ndrg4Q8BTG7 352 aaKnown RBP13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Tigd4Q8BUZ3 513 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Ncr1Q8C567 325 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 A730049H05RikQ8C940 139 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Dleu7Q8CHZ8 209 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Olfr788Q8VFI0 311 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Spryd4Q91WK1 207 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 GatbQ99JT1 557 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 DenrQ9CQJ6 198 aaKnown RBP13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Pop4Q9CR08 221 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Ddx28Q9CWT6 540 aaKnown RBP13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Yif1bQ9CX30 311 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Ceacam20Q9D2Z1 577 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Ptp4a3Q9D658 173 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Tmem41aQ9D8U2 264 aa13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Exosc1Q9DAA6 195 aaKnown RBP13.24□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Igkv4-63A0A0G2JFU6 117 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Pdia2D3Z6P0 527 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Gm9008E9PVG0 424 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Mettl7a3G3X9G9 244 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Gm21897J3KMP5 500 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Capn1O35350 713 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Serpine1P22777 402 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Impdh2P24547 514 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Olfr6P34986 316 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Gadd45aP48316 165 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Cdk5P49615 292 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Sox14Q04892 240 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Cass4Q08EC4 804 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 SctrQ5FWI2 447 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Vmn1r196Q5SVD5 301 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Spin1Q61142 262 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 SrmsQ62270 496 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Gm13757Q7TR17 305 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Olfr884Q7TRE1 309 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Olfr295Q7TS08 309 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Thnsl2Q80W22 483 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 SergefQ80YD6 464 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Ss18l1Q8BW22 402 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 BpifcQ8C186 509 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Tmem163Q8C996 288 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Angptl7Q8R1Q3 337 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Olfr1079Q8VF52 315 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Olfr1443Q8VFW8 312 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Slc27a4Q91VE0 643 aaKnown RBP13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Dusp7Q91Z46 422 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Slc35a5Q921R7 437 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 PrkxQ922R0 355 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Nmrk2Q9D7C9 195 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Olfr937Q9EQB4 311 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Fn3kQ9ER35 309 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Fezf2Q9ESP5 455 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Kat2aQ9JHD2 830 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Tspan32Q9JHH2 256 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Ptges3Q9R0Q7 160 aaKnown RBP13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Kcnj16Q9Z307 419 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Celsr1O35161 3034 aa13.23□□□□□ -0.29
Ercc1-201ENSMUST00000003645 2610044O15Rik8A0A087WRJ1 410 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Gm43517E9PYS1 339 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Gm2663F6R7E8 247 aaKnown RBP13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Vmn2r36K7N741 852 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Hsd17b10O08756 261 aaKnown RBP13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Psmb10O35955 273 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Klrg1O88713 188 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 AdaP03958 352 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Il1r1P13504 576 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Il9P15247 144 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 ThP24529 498 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Guca2aP33680 116 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 S1pr2P52592 352 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Rps4xP62702 263 aaKnown RBP13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 SmsP97355 366 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Atf4Q06507 349 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Adrbk2Q3UYH7 688 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Snx33Q4VAA7 574 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 FcrlbQ5DRQ8 427 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Olfr332Q5NC45 344 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Klra4Q60651 263 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Olfr11Q60890 313 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Nr0b1Q61066 472 aa13.22□□□□□ -0.29
Ercc1-201ENSMUST00000003645 Slc22a13Q6A4L0 551 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms