RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PPP1R32Q7Z5V6 425 aa15.54■□□□□ 0.08
PHGDH-234ENST00000642041 P2RY8Q86VZ1 359 aa15.54■□□□□ 0.08
PHGDH-234ENST00000642041 TMEM156Q8N614 296 aa15.54■□□□□ 0.08
PHGDH-234ENST00000642041 ITLN2Q8WWU7 325 aaPredicted RBP15.54■□□□□ 0.08
PHGDH-234ENST00000642041 C8orf44Q96CB5 159 aa15.54■□□□□ 0.08
PHGDH-234ENST00000642041 FER1L6-AS2Q96M78 137 aa15.54■□□□□ 0.08
PHGDH-234ENST00000642041 LMF1Q96S06 567 aa15.54■□□□□ 0.08
PHGDH-234ENST00000642041 PLA2G12AQ9BZM1 189 aa15.54■□□□□ 0.08
PHGDH-234ENST00000642041 DSN1Q9H410 356 aa15.54■□□□□ 0.08
PHGDH-234ENST00000642041 C20orf141Q9NUB4 165 aa15.54■□□□□ 0.08
PHGDH-234ENST00000642041 OSGIN1Q9UJX0 560 aa15.54■□□□□ 0.08
PHGDH-234ENST00000642041 MOKQ9UQ07 419 aa15.54■□□□□ 0.08
PHGDH-234ENST00000642041 WIF1Q9Y5W5 379 aa15.54■□□□□ 0.08
PHGDH-234ENST00000642041 TMED7-TICAM2A0A0A6YYA0 188 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 TMEM200CA6NKL6 621 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 SOCS6O14544 535 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 SEC14L5O43304 696 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 PIP5K1CO60331 668 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 ITGA10O75578 1167 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 OR2J2O76002 312 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 ASAH2BP0C7U1 165 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 PSMB9P28065 219 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 RPL4P36578 427 aaKnown RBP15.53■□□□□ 0.08
PHGDH-234ENST00000642041 MLF1P58340 268 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 TIGD6Q17RP2 521 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 CLEC12AQ5QGZ9 265 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 GPR107Q5VW38 600 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 SLC22A10Q63ZE4 541 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 TMPRSS11AQ6ZMR5 421 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 ZADH2Q8N4Q0 377 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 C10orf53Q8N6V4 93 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 NANOGP1Q8N7R0 232 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 SCAIQ8N9R8 606 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 OR8D4Q8NGM9 314 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 OR51A7Q8NH64 312 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 RELTQ969Z4 430 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 ZBTB8AQ96BR9 441 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 TNFRSF13CQ96RJ3 184 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 MNTQ99583 582 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 COQ7Q99807 217 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 ASPNQ9BXN1 380 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 TIMMDC1Q9NPL8 285 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 ATP13A2Q9NQ11 1180 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 NRIP3Q9NQ35 241 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 ENPP5Q9UJA9 477 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 TMED7Q9Y3B3 224 aa15.53■□□□□ 0.08
PHGDH-234ENST00000642041 KPNA4O00629 521 aaPredicted RBP15.52■□□□□ 0.08
PHGDH-234ENST00000642041 SCO2O43819 266 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 AHCYL1O43865 530 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 ADAM11O75078 769 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 GABARAPO95166 117 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 OR6A2O95222 327 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 TXNDC12O95881 172 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 CH25HO95992 272 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 CD14P08571 375 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 TSPAN19P0C672 248 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 SERPINB10P48595 397 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 KRTAP10-9P60411 292 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 BDH1Q02338 343 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 ACSM1Q08AH1 577 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 GPR50Q13585 617 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 SPHARQ15513 63 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 FAM205BPQ63HN1 556 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 LYPD8Q6UX82 237 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 HDDC2Q7Z4H3 204 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 NANOGNBQ7Z5D8 188 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 GATSQ8NAP1 163 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 POMGNT2Q8NAT1 580 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 OR4Q3Q8NH05 313 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 MFSD8Q8NHS3 518 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 TM9SF4Q92544 642 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 TMIGD2Q96BF3 282 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 C12orf43Q96C57 262 aaKnown RBP15.52■□□□□ 0.08
PHGDH-234ENST00000642041 RNFT2Q96EX2 444 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 YIPF3Q9GZM5 350 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 HPF1Q9NWY4 346 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 DNAJC27Q9NZQ0 273 aa15.52■□□□□ 0.08
PHGDH-234ENST00000642041 ARPC4-TTLL3A0A0A6YYG9 625 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 NPIPB13A6NJU9 1138 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 NPIPB4C9JG80 1138 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 CCRL2O00421 344 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 PRKNO60260 465 aaPredicted RBP15.51■□□□□ 0.07
PHGDH-234ENST00000642041 GTF2E2P29084 291 aaKnown RBP15.51■□□□□ 0.07
PHGDH-234ENST00000642041 C21orf33P30042 268 aaPredicted RBP15.51■□□□□ 0.07
PHGDH-234ENST00000642041 CASP3P42574 277 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 GAS1P54826 345 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 FBXW4P57775 412 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 HSF2Q03933 536 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 MLLT11Q13015 90 aaPredicted RBP15.51■□□□□ 0.07
PHGDH-234ENST00000642041 ITGADQ13349 1161 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 DYNC1I2Q13409 638 aaKnown RBP15.51■□□□□ 0.07
PHGDH-234ENST00000642041 ATP1A4Q13733 1029 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 PON3Q15166 354 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 SGCBQ16585 318 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 ALG10Q5BKT4 473 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 ADCK1Q86TW2 530 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 IQCF1Q8N6M8 205 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 OR13C2Q8NGS9 318 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 OR52N1Q8NH53 320 aa15.51■□□□□ 0.07
PHGDH-234ENST00000642041 PAQR8Q8TEZ7 354 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms