RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CDRT15L2A8MXV6 281 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 MCIDASD6RGH6 385 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 PRR23D1E9PI22 279 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 BHLHE40O14503 412 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 ADAM10O14672 748 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 TERTO14746 1132 aaKnown RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 TBX1O43435 398 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 AKAP8O43823 692 aaKnown RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 APOL3O95236 402 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 F10P00742 488 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 PRR23D2P0DMB1 279 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 LIFP15018 202 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 PRKCAP17252 672 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 PAICSP22234 425 aaKnown RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 HTR1FP30939 366 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 CASRP41180 1078 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 AQP2P41181 271 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 APOBEC1P41238 236 aaKnown RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 CDH11P55287 796 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 CTXN1P60606 82 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 PRPS1P60891 318 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 ERVK-25P63136 954 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 EGR4Q05215 589 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 LTBQ06643 244 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 SNTA1Q13424 505 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 TRAM1Q15629 374 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 INPP5JQ15735 1006 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 ACER2Q5QJU3 275 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 ZNF468Q5VIY5 522 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 ABHD17BQ5VST6 288 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 C1orf140Q5VVS0 124 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 NXNL2Q5VZ03 156 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 JMJD6Q6NYC1 403 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 XKRXQ6PP77 449 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 TMPRSS11AQ6ZMR5 421 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 DPY19L2P2Q6ZN68 376 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 MAMDC2Q7Z304 686 aaPredicted RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 VASH2Q86V25 355 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 PLCZ1Q86YW0 608 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 BEST3Q8N1M1 668 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 LNX2Q8N448 690 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 GDPD1Q8N9F7 314 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 POC5Q8NA72 575 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 BBS1Q8NFJ9 593 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 OR52E2Q8NGJ4 325 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 OR1J4Q8NGS1 313 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 MOSPD2Q8NHP6 518 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 RNF138Q8WVD3 245 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 ADAMTS14Q8WXS8 1223 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 DDIT4LQ96D03 193 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 FER1L6-AS2Q96M78 137 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 KCTD7Q96MP8 289 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 IP6K3Q96PC2 410 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 SECISBP2Q96T21 854 aaKnown RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 ARHGAP9Q9BRR9 750 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 KATNB1Q9BVA0 655 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 FAM117AQ9C073 453 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 OR11A1Q9GZK7 315 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 OR51V1Q9H2C8 321 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 FKRPQ9H9S5 495 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 HINT3Q9NQE9 182 aaKnown RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 ABCB10Q9NRK6 738 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 SERINC1Q9NRX5 453 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 TAS2R16Q9NYV7 291 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 STMN3Q9NZ72 180 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 METRNQ9UJH8 293 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 KLHL21Q9UJP4 597 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 DKKL1Q9UK85 242 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 FBXL2Q9UKC9 423 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 GSTK1Q9Y2Q3 226 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 SF3B6Q9Y3B4 125 aaKnown RBP8.01□□□□□ -1.13
PHGDH-219ENST00000641513 CMAHPQ9Y471 501 aa8.01□□□□□ -1.13
PHGDH-219ENST00000641513 CACNA1GO43497 2377 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 IGLV3-32A0A0A0MS00 114 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 ARGFXA6NJG6 315 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 PROB1E7EW31 1015 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 C11orf98E9PRG8 122 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 H3BML4 177 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 WISP1O95388 367 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 IGF2P01344 180 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 HLA-DQB1P01920 261 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 BGLAPP02818 100 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 TSPAN19P0C672 248 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 LIMS3P0CW19 117 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 LIMS4P0CW20 117 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 LIPCP11150 499 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 PEPDP12955 493 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 AHCYP23526 432 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 GRPRP30550 384 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 TNFSF8P32971 234 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 RPS19P39019 145 aaKnown RBP8□□□□□ -1.13
PHGDH-219ENST00000641513 DNASE1L1P49184 302 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 CYB561P49447 251 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 ETV1P50549 477 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 RPL18Q07020 188 aaKnown RBP8□□□□□ -1.13
PHGDH-219ENST00000641513 AIMP2Q13155 320 aaKnown RBP8□□□□□ -1.13
PHGDH-219ENST00000641513 ASAH1Q13510 395 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 CRMP1Q14194 572 aa8□□□□□ -1.13
PHGDH-219ENST00000641513 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8□□□□□ -1.13
PHGDH-219ENST00000641513 PLPPR5Q32ZL2 321 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms