RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 SCO2O43819 266 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 GMFGO60234 142 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 DPM1O60762 260 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 GKN3PP0CG01 181 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 EIF2S3P41091 472 aaKnown RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 HLCSP50747 726 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 HOXC5Q00444 222 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 SKP2Q13309 424 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 HYAL4Q2M3T9 481 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 NDUFAF6Q330K2 333 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 Q3ZCU0 254 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 ABHD17BQ5VST6 288 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 OR2T5Q6IEZ7 315 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 DEF8Q6ZN54 512 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 MARCH3Q86UD3 253 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 BEST3Q8N1M1 668 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 OR2T29Q8NH02 315 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 PHF10Q8WUB8 498 aaKnown RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 CENPNQ96H22 339 aaPredicted RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 PGAM5Q96HS1 289 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 C5orf34Q96MH7 638 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 UBL7Q96S82 380 aaPredicted RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 ZNF347Q96SE7 839 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 SECISBP2Q96T21 854 aaKnown RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 COQ7Q99807 217 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 SEMA6AQ9H2E6 1030 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 NTN4Q9HB63 628 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 SH2D2AQ9NP31 389 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 VNN3Q9NY84 501 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 STMN3Q9NZ72 180 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 SLC23A1Q9UHI7 598 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 OSGIN1Q9UJX0 560 aa7.22□□□□□ -1.25
SCARB2-220ENST00000640076 RPH3AQ9Y2J0 694 aaPredicted RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 FAM32AQ9Y421 112 aaKnown RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 CHCHD2Q9Y6H1 151 aaPredicted RBP7.22□□□□□ -1.25
SCARB2-220ENST00000640076 A6NL46 340 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 C17orf51A8MQB3 221 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 ZNF264O43296 627 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 CYP7B1O75881 506 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 RASAL1O95294 804 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 ANGPTL1O95841 491 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 GABRB1P18505 474 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 PTGDSP41222 190 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 HTR2BP41595 481 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 KIR2DL2P43627 348 aaPredicted RBP7.21□□□□□ -1.26
SCARB2-220ENST00000640076 CLK3P49761 638 aaKnown RBP7.21□□□□□ -1.26
SCARB2-220ENST00000640076 IST1P53990 364 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 GAS1P54826 345 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 RAC3P60763 192 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 NPRL3Q12980 569 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 SNCBQ16143 134 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 DEFB109BQ30KR1 87 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 BICRALQ6AI39 1079 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 CBLN3Q6UW01 205 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 ZNF605Q86T29 641 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 RANBP3LQ86VV4 465 aaPredicted RBP7.21□□□□□ -1.26
SCARB2-220ENST00000640076 CYP4Z1Q86W10 505 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 GPALPP1Q8IXQ4 340 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 PAQR8Q8TEZ7 354 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 ARSGQ96EG1 525 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 MCHR1Q99705 422 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 BDH2Q9BUT1 245 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 GALNT9Q9HCQ5 603 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 EXOSC3Q9NQT5 275 aaKnown RBP7.21□□□□□ -1.26
SCARB2-220ENST00000640076 ANKRD10Q9NXR5 420 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 GPR83Q9NYM4 423 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 STOML1Q9UBI4 398 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 DNAJB11Q9UBS4 358 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 TESQ9UGI8 421 aaKnown RBP7.21□□□□□ -1.26
SCARB2-220ENST00000640076 A4GNTQ9UNA3 340 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 NTNG1Q9Y2I2 539 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 U3KQE9 123 aa7.21□□□□□ -1.26
SCARB2-220ENST00000640076 TPRP12270 2363 aaKnown RBP7.21□□□□□ -1.26
SCARB2-220ENST00000640076 ZSCAN5BA6NJL1 495 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 HSBP1L1C9JCN9 74 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 GNGT2O14610 69 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 ADAMDEC1O15204 470 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 HCRTR2O43614 444 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 EIF4E2O60573 245 aaKnown RBP7.2□□□□□ -1.26
SCARB2-220ENST00000640076 OR5F1O95221 314 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 CCL3P10147 92 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 HTR2AP28223 471 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 RRM2P31350 389 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 CYB561P49447 251 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 ZNF117Q03924 483 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 TLE3Q04726 772 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 SNTA1Q13424 505 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 FHL3Q13643 280 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 RAPSNQ13702 412 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 GANABQ14697 944 aaKnown RBP7.2□□□□□ -1.26
SCARB2-220ENST00000640076 TRIP10Q15642 601 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 ENTPD8Q5MY95 495 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 AGAP7PQ5VUJ5 663 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 TMEM81Q6P7N7 255 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 RTL4Q6ZR62 310 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 ZNF550Q7Z398 422 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 MDGA2Q7Z553 956 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 MISPQ8IVT2 679 aa7.2□□□□□ -1.26
SCARB2-220ENST00000640076 APLFQ8IW19 511 aaPredicted RBP7.2□□□□□ -1.26
SCARB2-220ENST00000640076 ZNF440Q8IYI8 595 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms