RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 ZNF613Q6PF04 617 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CLEC17AQ6ZS10 378 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 MOB3CQ70IA8 216 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 NAT14Q8WUY8 206 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 WBP2Q969T9 261 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 CLDN23Q96B33 292 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ZBTB8AQ96BR9 441 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 AURKBQ96GD4 344 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-218ENST00000640036 MRGPRX3Q96LB0 322 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 SULT4A1Q9BR01 284 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 SLC22A4Q9H015 551 aa4.63□□□□□ -1.67
SCN1A-218ENST00000640036 ACOT8O14734 319 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 PPM1DO15297 605 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 EIF4E2O60573 245 aaKnown RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 STT3AP46977 705 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ZIK1Q3SY52 487 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 PWWP2BQ6NUJ5 590 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 LEG1Q6P5S2 330 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF704Q6ZNC4 412 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 USP43Q70EL4 1123 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 MRGPREQ86SM8 312 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ZSWIM9Q86XI8 627 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 OR4D6Q8NGJ1 314 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SLC26A1Q9H2B4 701 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 AMDHD2Q9Y303 409 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 TEX13DA0A0J9YY54 714 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SLC31A2O15432 143 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ENTPD6O75354 484 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 GABBR2O75899 941 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 FAM155BO75949 473 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 CEACAM5P06731 702 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 RPL7P18124 248 aaKnown RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 GPR6P46095 362 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 RPS16P62249 146 aaKnown RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 TCTN3Q6NUS6 607 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 TRMT10BQ6PF06 316 aaKnown RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SPICQ8N5J4 248 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 NPWQ8N729 165 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SUMF1Q8NBK3 374 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 MCFD2Q8NI22 146 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 FAM71F1Q96KD3 344 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 CIB1Q99828 191 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 MECRQ9BV79 373 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 LRRC3Q9BY71 257 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 CNOT11Q9UKZ1 510 aaKnown RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SSC5DA1L4H1 1573 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 TP53BP1Q12888 1972 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 F6UZH7 168 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 BOLA2-SMG1P6H3BVE0 249 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ERVH48-1M5A8F1 160 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SLC25A17O43808 307 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 NFYBP25208 207 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 CEACAM3P40198 252 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 CEACAM7Q14002 265 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 HMGN3Q15651 99 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 LIPKQ5VXJ0 399 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 RHBDD2Q6NTF9 364 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 GHITMQ9H3K2 345 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 FN3KRPQ9HA64 309 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 PNPOQ9NVS9 261 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 USP36Q9P275 1121 aaKnown RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SLC17A6Q9P2U8 582 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 POLDIP2Q9Y2S7 368 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SLC6A5Q9Y345 797 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SRRM3A6NNA2 597 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 AHRRA9YTQ3 701 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 K7EQM0 130 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 RGS9O75916 674 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 HTR3BO95264 441 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 OPN1SWP03999 348 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 FUT1P19526 365 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 MAP2K3P46734 347 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 RORCP51449 518 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 DGCR6Q14129 220 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 LTC4SQ16873 150 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 TRNP1Q6NT89 227 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 RANBP10Q6VN20 620 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF551Q7Z340 670 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-218ENST00000640036 GRINAQ7Z429 371 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 BEST3Q8N1M1 668 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 GLIS1Q8NBF1 620 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 OR10G2Q8NGC3 310 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SFXN5Q8TD22 340 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 CCL17Q92583 94 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 GTF2H4Q92759 462 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 MAL2Q969L2 176 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SLC41A2Q96JW4 573 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 OSBPL7Q9BZF2 842 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 HAPLN2Q9GZV7 340 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 OCIAD1Q9NX40 245 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 RASD1Q9Y272 281 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SCN10AQ9Y5Y9 1956 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 UNC119BA6NIH7 251 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 ZNF850A8MQ14 1090 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SHOXO15266 292 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 SPINT2O43291 252 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 GOSR1O95249 250 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 NUDT7P0C024 238 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 FOLR1P15328 257 aa4.62□□□□□ -1.67
SCN1A-218ENST00000640036 PPP3CBP16298 524 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms