RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TRAF4Q9BUZ4 470 aaPredicted RBP6.42□□□□□ -1.38
NECAP1-220ENST00000639841 ASB6Q9NWX5 421 aa6.42□□□□□ -1.38
NECAP1-220ENST00000639841 ELOVL2Q9NXB9 296 aa6.42□□□□□ -1.38
NECAP1-220ENST00000639841 MYEF2Q9P2K5 600 aaKnown RBP6.42□□□□□ -1.38
NECAP1-220ENST00000639841 CLN8Q9UBY8 286 aa6.42□□□□□ -1.38
NECAP1-220ENST00000639841 PSMD13Q9UNM6 376 aa6.42□□□□□ -1.38
NECAP1-220ENST00000639841 A0A1B0GVT2 93 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 FAM74A7A6NL05 159 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 RAB29O14966 203 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 TMEM50AO95807 157 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 CA1P00915 261 aaPredicted RBP6.41□□□□□ -1.38
NECAP1-220ENST00000639841 HSMCR30P0CW71 290 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 CNR1P21554 472 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 PPIDQ08752 370 aaKnown RBP6.41□□□□□ -1.38
NECAP1-220ENST00000639841 CALCOCO2Q13137 446 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 FOXE3Q13461 319 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 FAM74A3Q4VXF1 159 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 BHLHB9Q6PI77 547 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 LANCL3Q6ZV70 420 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 MOB3BQ86TA1 216 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 RANBP3LQ86VV4 465 aaPredicted RBP6.41□□□□□ -1.38
NECAP1-220ENST00000639841 NUDCD3Q8IVD9 361 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 NUBPLQ8TB37 319 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 FANK1Q8TC84 345 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 PIK3R3Q92569 461 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 NR4A3Q92570 626 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 GTF2H4Q92759 462 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 CCDC124Q96CT7 223 aaKnown RBP6.41□□□□□ -1.38
NECAP1-220ENST00000639841 MRPL45Q9BRJ2 306 aaKnown RBP6.41□□□□□ -1.38
NECAP1-220ENST00000639841 NAT9Q9BTE0 207 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 NAGKQ9UJ70 344 aa6.41□□□□□ -1.38
NECAP1-220ENST00000639841 GOLGA8JA6NMD2 632 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 TAPBPO15533 448 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 TOXO94900 526 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 CCNB2O95067 398 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 AHSA1O95433 338 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 GP1BBP13224 206 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 ERVPABLB-1P60509 514 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 MADCAM1Q13477 382 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 ZNF234Q14588 700 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 LRRC37A5PQ49AS3 106 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 MANEAQ5SRI9 462 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 FAM122BQ7Z309 247 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 ERI1Q8IV48 349 aaKnown RBP6.4□□□□□ -1.38
NECAP1-220ENST00000639841 CDK20Q8IZL9 346 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 DEFB119Q8N690 84 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 OR5B17Q8NGF7 314 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 ADOQ96SZ5 270 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 CLMPQ9H6B4 373 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 PACSIN3Q9UKS6 424 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 PEX16Q9Y5Y5 336 aa6.4□□□□□ -1.38
NECAP1-220ENST00000639841 MUC22E2RYF6 1773 aaPredicted RBP6.4□□□□□ -1.38
NECAP1-220ENST00000639841 MYO18AQ92614 2054 aaKnown RBP6.4□□□□□ -1.38
NECAP1-220ENST00000639841 PVALEFA0A1B0GWK0 134 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 A0A1W2PNV4 684 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 SNAI2O43623 268 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 DIRAS1O95057 198 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 TSPAN13O95857 204 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 CST4P01036 141 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 NR3C1P04150 777 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 P04436 131 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 RAG2P55895 527 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 INCA1Q0VD86 236 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 KLRB1Q12918 225 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 ATXN7L3Q14CW9 347 aaPredicted RBP6.4□□□□□ -1.39
NECAP1-220ENST00000639841 SF3B4Q15427 424 aaKnown RBP eCLIP6.4□□□□□ -1.394e-7■■■■■ 38
NECAP1-220ENST00000639841 PIK3CD-AS1Q5SR53 167 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 ZNF691Q5VV52 312 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 LEG1Q6P5S2 330 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 MBOAT1Q6ZNC8 495 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 Q6ZSR3 168 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 ASRGL1Q7L266 308 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 MARVELD2Q8N4S9 558 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 CSNK1A1LQ8N752 337 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 SNX31Q8N9S9 440 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 OR5L2Q8NGL0 311 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 RDH11Q8TC12 318 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 CTRCQ99895 268 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 ZNF703Q9H7S9 590 aaPredicted RBP6.4□□□□□ -1.39
NECAP1-220ENST00000639841 ZDHHC4Q9NPG8 344 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 OR2S2Q9NQN1 319 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 IFNKQ9P0W0 207 aa6.4□□□□□ -1.39
NECAP1-220ENST00000639841 APC2O95996 2303 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 AKAP13Q12802 2813 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 TRBV5-3A0A0A0MS03 114 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 A0A0G2JK05 382 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 GOLGA6L9A6NEM1 432 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 RFXANKO14593 260 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 B4GAT1O43505 415 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 STX10O60499 249 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 ENTPD5O75356 428 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 XRCC1P18887 633 aaPredicted RBP6.39□□□□□ -1.39
NECAP1-220ENST00000639841 GNLYP22749 145 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 BDKRB1P46663 353 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 MRPL19P49406 292 aaKnown RBP6.39□□□□□ -1.39
NECAP1-220ENST00000639841 INHBCP55103 352 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 RGS21Q2M5E4 152 aa6.39□□□□□ -1.39
NECAP1-220ENST00000639841 TP53I3Q53FA7 332 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms