RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 RANBP3Q9H6Z4 567 aaPredicted RBP1.54□□□□□ -2.16
CCDC7-211ENST00000638889 TM9SF3Q9HD45 589 aa1.54□□□□□ -2.16
CCDC7-211ENST00000638889 SLCO1B3Q9NPD5 702 aa1.54□□□□□ -2.16
CCDC7-211ENST00000638889 CTPS2Q9NRF8 586 aa1.54□□□□□ -2.16
CCDC7-211ENST00000638889 THUMPD1Q9NXG2 353 aaKnown RBP1.54□□□□□ -2.16
CCDC7-211ENST00000638889 HOOK1Q9UJC3 728 aaKnown RBP1.54□□□□□ -2.16
CCDC7-211ENST00000638889 F11RQ9Y624 299 aaKnown RBP1.54□□□□□ -2.16
CCDC7-211ENST00000638889 SF3B1O75533 1304 aaKnown RBP eCLIP1.54□□□□□ -2.16
CCDC7-211ENST00000638889 NFASCO94856 1347 aa1.54□□□□□ -2.16
CCDC7-211ENST00000638889 MN1Q10571 1320 aaPredicted RBP1.54□□□□□ -2.16
CCDC7-211ENST00000638889 CLDN3O15551 220 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 ALDOBP05062 364 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 IGHV3-43DP0DP04 118 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 IMPDH1P20839 514 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 GCAP28676 217 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 GSSP48637 474 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 FGF8P55075 233 aaPredicted RBP1.53□□□□□ -2.16
CCDC7-211ENST00000638889 CACNG7P62955 275 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 PDIA2Q13087 525 aaKnown RBP1.53□□□□□ -2.16
CCDC7-211ENST00000638889 VGLL4Q14135 290 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 PCM1Q15154 2024 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 INAQ16352 499 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 PRSS8Q16651 343 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 COA6Q5JTJ3 125 aaKnown RBP1.53□□□□□ -2.16
CCDC7-211ENST00000638889 SHISA6Q6ZSJ9 500 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 PGAP1Q75T13 922 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 ZNF546Q86UE3 836 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 MMAAQ8IVH4 418 aaKnown RBP1.53□□□□□ -2.16
CCDC7-211ENST00000638889 ZNF679Q8IYX0 411 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 FADS6Q8N9I5 356 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 OR1F12Q8NHA8 337 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 FGF14Q92915 247 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 EFHD2Q96C19 240 aaPredicted RBP1.53□□□□□ -2.16
CCDC7-211ENST00000638889 OR10C1Q96KK4 312 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 OXGR1Q96P68 337 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 OR2A5Q96R48 311 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 RAB34Q9BZG1 259 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 SPNS1Q9H2V7 528 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 ELOVL3Q9HB03 270 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 XCL2Q9UBD3 114 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 RFNGQ9Y644 331 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 U3KQV3 271 aa1.53□□□□□ -2.16
CCDC7-211ENST00000638889 PHF3Q92576 2039 aaKnown RBP1.52□□□□□ -2.17
CCDC7-211ENST00000638889 FANCIQ9NVI1 1328 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 IGHV5-51A0A0C4DH38 117 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 A0A1B0GVX0 72 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 A0A1W2PP18 115 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 C7orf66A4D0T2 115 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 H3BNH8 94 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 RPL36A-HNRNPH2H7BZ11 118 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 CCER2I3L3R5 266 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 XKRYO14609 159 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 BCAS1O75363 584 aaPredicted RBP1.52□□□□□ -2.17
CCDC7-211ENST00000638889 BGLAPP02818 100 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 GKN3PP0CG01 181 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 PSMC3P17980 439 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 MAPK3P27361 379 aaPredicted RBP1.52□□□□□ -2.17
CCDC7-211ENST00000638889 ACVR1Q04771 509 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 KLHL30Q0D2K2 578 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 C1orf61Q13536 156 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 OXA1LQ15070 435 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 TATDN3Q17R31 274 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 COX19Q49B96 90 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 BEND3Q5T5X7 828 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 FBXW9Q5XUX1 488 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 NCR3LG1Q68D85 454 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 PYHIN1Q6K0P9 492 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 AFTPHQ6ULP2 937 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 CES3Q6UWW8 571 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 FAM92BQ6ZTR7 304 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 TICAM2Q86XR7 235 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 SLC35F2Q8IXU6 374 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 VN1R2Q8NFZ6 395 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 OR52P1PQ8NH57 321 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 ZNF461Q8TAF7 563 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 SYNPRQ8TBG9 265 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 RNF2Q99496 336 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 OMDQ99983 421 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 CALYQ9NYX4 217 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 MRPS33Q9Y291 106 aaKnown RBP1.52□□□□□ -2.17
CCDC7-211ENST00000638889 OR10H1Q9Y4A9 318 aa1.52□□□□□ -2.17
CCDC7-211ENST00000638889 FCGBPQ9Y6R7 5405 aaPredicted RBP1.51□□□□□ -2.17
CCDC7-211ENST00000638889 IGHV3-66A0A0C4DH42 116 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 F5H6K3 240 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 MAPK13O15264 365 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 MFN2O95140 757 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 AK1P00568 194 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 ADRA2AP08913 450 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 CSF3P09919 207 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 PNMTP11086 282 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 GYG1P46976 350 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 IL1RL1Q01638 556 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 KLRC3Q07444 240 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 VAX1Q5SQQ9 334 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 DNLZQ5SXM8 178 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 C1orf220Q5T0J3 134 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 H2AFVQ71UI9 128 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 CCDC65Q8IXS2 484 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 ZADH2Q8N4Q0 377 aa1.51□□□□□ -2.17
CCDC7-211ENST00000638889 OR4D5Q8NGN0 318 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms