RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 CHIAQ9BZP6 476 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 PPA2Q9H2U2 334 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 CDCP1Q9H5V8 836 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 Q9N2J8 555 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 RDH8Q9NYR8 311 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 COQ3Q9NZJ6 369 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 PIPOXQ9P0Z9 390 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 PPIEQ9UNP9 301 aaKnown RBP18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 A0A1B0GVT2 93 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 SNRPGP15A8MWD9 76 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 PRR32B1ATL7 298 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 TRIM77I1YAP6 450 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 PSMD9O00233 223 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 CDK2P24941 298 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 GRPRP30550 384 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 MAGEB1P43366 347 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 SLC25A1P53007 311 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 RAP2BP61225 183 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 GXYLT1Q4G148 440 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 NHLRC3Q5JS37 347 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 LEG1Q6P5S2 330 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 NPSR1Q6W5P4 371 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 SLC16A9Q7RTY1 509 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 C3orf49Q96BT1 292 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 TSPAN10Q9H1Z9 355 aaPredicted RBP18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 STARD5Q9NSY2 213 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 HRASLS2Q9NWW9 162 aa18.37■□□□□ 0.53
SYNGAP1-227ENST00000638142 A0A1W2PQF6 199 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 PLSCR5A0PG75 271 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 SERINC4A6NH21 518 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 GRXCR1A8MXD5 290 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 NAGAP17050 411 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 CTRB1P17538 263 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 NDUFAF6Q330K2 333 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 LINC00303Q3SY05 128 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 ZNF626Q68DY1 528 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 CTRB2Q6GPI1 263 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 THEM6Q8WUY1 208 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 ZNF69Q9UC07 566 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 MOKQ9UQ07 419 aa18.36■□□□□ 0.53
SYNGAP1-227ENST00000638142 hCG_1807616A0A1W2PRN6 198 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 FOXS1O43638 330 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 NDUFB6O95139 128 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 ALDOBP05062 364 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 HOXD4P09016 255 aaPredicted RBP18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 HOXB2P14652 356 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 COL9A1P20849 921 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 ALG11Q2TAA5 492 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 LRRN1Q6UXK5 716 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 IQCF2Q8IXL9 164 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 OR9A4Q8NGU2 314 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 OR5AK2Q8NH90 309 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 CCNL2Q96S94 520 aaPredicted RBP18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 TMPRSS13Q9BYE2 586 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 CPNE7Q9UBL6 633 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 DTX4Q9Y2E6 619 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 TICRRQ7Z2Z1 1910 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 OR2A4O95047 310 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 EGFP01133 1207 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 HNRNPA2B1P22626 353 aaKnown RBP18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 TAS2R20P59543 309 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 ALKBH1Q13686 389 aaKnown RBP18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 KIAA1324Q6UXG2 1013 aaKnown RBP18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 DNM1P46Q6ZS02 220 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 JAZF1Q86VZ6 243 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 DND1Q8IYX4 353 aaKnown RBP18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 SIPA1Q96FS4 1042 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 SPACA7Q96KW9 195 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 OR2A7Q96R45 310 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 WSB2Q9NYS7 404 aaPredicted RBP18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 HCN3Q9P1Z3 774 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 DOCK8Q8NF50 2099 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 FANCMQ8IYD8 2048 aa18.35■□□□□ 0.53
SYNGAP1-227ENST00000638142 CTNSO60931 367 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 IGF2P01344 180 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 ACSM4P0C7M7 580 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 APEHP13798 732 aaKnown RBP18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 ZP3P21754 424 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 DCTDP32321 178 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 CDKN2AP42771 156 aaKnown RBP18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 PSMA6P60900 246 aaKnown RBP18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 STPG1Q5TH74 334 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 ZNF440Q8IYI8 595 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 MOSPD2Q8NHP6 518 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 PATE1Q8WXA2 126 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 Q96M85 177 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 CA10Q9NS85 328 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 PCDHGA5Q9Y5G8 931 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 TRBV5-5A0A0J9YX44 114 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 HRKO00198 91 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 PRAMEF2O60811 474 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 UPK3AO75631 287 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 SERPINI2O75830 405 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 OR8G3PP0DMU2 310 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 GRK6P43250 576 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 SCAND1P57086 179 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 FAM198BQ6UWH4 519 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 CHMP1BQ7LBR1 199 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 ZNF511Q8NB15 262 aa18.34■□□□□ 0.53
SYNGAP1-227ENST00000638142 ELSPBP1Q96BH3 223 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms