RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 SLC15A1P46059 708 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 NUDT6P53370 316 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 CARD18P57730 90 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 RPL27P61353 136 aaKnown RBP10.56□□□□□ -0.72
CLN6-223ENST00000637823 TMED1Q13445 227 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 TBR1Q16650 682 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 KLHL22Q53GT1 634 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 PDSS1Q5T2R2 415 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 PAQR6Q6TCH4 344 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 ESPNLQ6ZVH7 1005 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 ASB18Q6ZVZ8 466 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 BCDIN3DQ7Z5W3 292 aaKnown RBP10.56□□□□□ -0.72
CLN6-223ENST00000637823 PXKQ7Z7A4 578 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 FAM109AQ8N4B1 249 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 TMEM99Q8N816 258 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 SLC37A3Q8NCC5 494 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 OR52E2Q8NGJ4 325 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 OR4K13Q8NH42 304 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 Q96M85 177 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 COPS4Q9BT78 406 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 AMBNQ9NP70 447 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 HINT3Q9NQE9 182 aaKnown RBP10.56□□□□□ -0.72
CLN6-223ENST00000637823 MRPS18AQ9NVS2 196 aaKnown RBP10.56□□□□□ -0.72
CLN6-223ENST00000637823 PAK1IP1Q9NWT1 392 aaPredicted RBP10.56□□□□□ -0.72
CLN6-223ENST00000637823 ERVK-18Q9QC07 812 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.56□□□□□ -0.72
CLN6-223ENST00000637823 CSAG2Q9Y5P2 127 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 SNX5Q9Y5X3 404 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 TEX13CA0A0J9YWL9 993 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 A0A1W2PNV4 684 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 IRGMA1A4Y4 181 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 FAM183AA6NL82 134 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 AQP7P3A6NL99 342 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 CDK1P06493 297 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 CELA3AP09093 270 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 DBTP11182 482 aaKnown RBP10.55□□□□□ -0.72
CLN6-223ENST00000637823 ATP6V1B1P15313 513 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 POU3F2P20265 443 aaPredicted RBP10.55□□□□□ -0.72
CLN6-223ENST00000637823 P2RY4P51582 365 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 AGFG1P52594 562 aaKnown RBP10.55□□□□□ -0.72
CLN6-223ENST00000637823 NR1H2P55055 460 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 RAC3P60763 192 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 H3F3AP84243 136 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 C19orf57Q0VDD7 668 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 ST3GAL4Q11206 333 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 CRMP1Q14194 572 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 ZNF169Q14929 603 aaPredicted RBP10.55□□□□□ -0.72
CLN6-223ENST00000637823 BCL2A1Q16548 175 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 HBMQ6B0K9 141 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 TMEM225Q6GV28 225 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 PLBD1Q6P4A8 553 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 MEPCEQ7L2J0 689 aaKnown RBP10.55□□□□□ -0.72
CLN6-223ENST00000637823 PRSS48Q7RTY5 328 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 JAZF1Q86VZ6 243 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 SPARTQ8N0X7 666 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 ARIH2OSQ8N7S6 290 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 NPEPL1Q8NDH3 523 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 SNRNP27Q8WVK2 155 aaKnown RBP10.55□□□□□ -0.72
CLN6-223ENST00000637823 SMPDL3BQ92485 455 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 OTULINQ96BN8 352 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 RASD2Q96D21 266 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 ZHX1-C8orf76Q96EF9 292 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 OXGR1Q96P68 337 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 TSPAN32Q96QS1 320 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 SNX18Q96RF0 628 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 DDOQ99489 341 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 MFRPQ9BY79 579 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 ZDHHC11Q9H8X9 412 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 TIGARQ9NQ88 270 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 WARS2Q9UGM6 360 aaKnown RBP10.55□□□□□ -0.72
CLN6-223ENST00000637823 RASD1Q9Y272 281 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 RAXQ9Y2V3 346 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 NOX1Q9Y5S8 564 aa10.55□□□□□ -0.72
CLN6-223ENST00000637823 A6NIZ1 184 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 XKRYO14609 159 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 TNFSF11O14788 317 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 VAMP5O95183 116 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 ACTL6AO96019 429 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 RENP00797 406 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 HTR1AP08908 422 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 HTR1FP30939 366 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 ACVR1BP36896 505 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 CDKN2AP42771 156 aaKnown RBP10.54□□□□□ -0.72
CLN6-223ENST00000637823 RPL5P46777 297 aaKnown RBP10.54□□□□□ -0.72
CLN6-223ENST00000637823 MTNR1AP48039 350 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 CD97P48960 835 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 STARP49675 285 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 LHX2P50458 406 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 DAP3P51398 398 aaKnown RBP10.54□□□□□ -0.72
CLN6-223ENST00000637823 SLC25A1P53007 311 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 CDH11P55287 796 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 CLDN20P56880 219 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 RAP1BP61224 184 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 RAP1AP62834 184 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 HSF1Q00613 529 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 ZNF91Q05481 1191 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 PIGFQ07326 219 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 LGALS3BPQ08380 585 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 RAB40BQ12829 278 aa10.54□□□□□ -0.72
CLN6-223ENST00000637823 KRR1Q13601 381 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms