RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ZNF701Q9NV72 531 aaPredicted RBP12.1□□□□□ -0.47
PNKP-228ENST00000637325 ARMCX1Q9P291 453 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 B3GAT1Q9P2W7 334 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 BAG5Q9UL15 447 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 RCE1Q9Y256 329 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 ATP23Q9Y6H3 246 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 TLN2Q9Y4G6 2542 aa12.1□□□□□ -0.47
PNKP-228ENST00000637325 CSPG4Q6UVK1 2322 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 TRAPPC13A5PLN9 417 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 MS4A18H0YCH9 400 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 FXYD1O00168 92 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 FZD7O75084 574 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 OR6A2O95222 327 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 INHBBP09529 407 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 DANCRP0C864 163 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 AHCYP23526 432 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 ROR2Q01974 943 aaKnown RBP12.09□□□□□ -0.47
PNKP-228ENST00000637325 LTBQ06643 244 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 VEZF1Q14119 521 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 NPTX1Q15818 432 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 PGGHGQ32M88 737 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 MS4A18Q3C1V0 323 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 TBRG1Q3YBR2 411 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 AGAP6Q5VW22 663 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 BIVMQ86UB2 503 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 CARM1Q86X55 608 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 POU5F2Q8N7G0 328 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 PIK3C3Q8NEB9 887 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 OR4D11Q8NGI4 311 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 RP9Q8TA86 221 aaKnown RBP12.09□□□□□ -0.47
PNKP-228ENST00000637325 ADAMTS16Q8TE57 1224 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 RCN3Q96D15 328 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 ZNF583Q96ND8 569 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 MOGAT1Q96PD6 335 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 ZNF317Q96PQ6 595 aaPredicted RBP12.09□□□□□ -0.47
PNKP-228ENST00000637325 KCNS3Q9BQ31 491 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 GSX1Q9H4S2 264 aaPredicted RBP12.09□□□□□ -0.47
PNKP-228ENST00000637325 FKRPQ9H9S5 495 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 OBP2BQ9NPH6 170 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 MRPL39Q9NYK5 338 aaKnown RBP12.09□□□□□ -0.47
PNKP-228ENST00000637325 SLC7A7Q9UM01 511 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 AP3M1Q9Y2T2 418 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 SH3GLB1Q9Y371 365 aa12.09□□□□□ -0.47
PNKP-228ENST00000637325 A0A096LPE4 126 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 LOC102725191A0A1B0GVB3 256 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 A0A1W2PPZ6 126 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 ZNF726A6NNF4 738 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 FAM220BPB1ANY3 271 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 LRRN3E7EW58 273 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 H7C1Q1 480 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 SMAD7O15105 426 aaKnown RBP12.08□□□□□ -0.48
PNKP-228ENST00000637325 SERPINI2O75830 405 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 ZNF432O94892 652 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 MT-ATP6P00846 226 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 HIST1H2ABP04908 130 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 PAX7P23759 505 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 CDKN1AP38936 164 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 FABP6P51161 128 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 SH3BGRP55822 239 aaPredicted RBP12.08□□□□□ -0.48
PNKP-228ENST00000637325 TAS2R41P59536 307 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 SLC25A3Q00325 362 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 POU3F1Q03052 451 aaPredicted RBP12.08□□□□□ -0.48
PNKP-228ENST00000637325 PUDPQ08623 228 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 SPOCK1Q08629 439 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 CARD17Q5XLA6 110 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 ANKRD16Q6P6B7 361 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 LINC00114Q6XXX2 140 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 HIST3H2AQ7L7L0 130 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 FBXL14Q8N1E6 418 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 OR2T12Q8NG77 320 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 OR5J2Q8NH18 312 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 BCL2L2Q92843 193 aaPredicted RBP12.08□□□□□ -0.48
PNKP-228ENST00000637325 HIST1H2ACQ93077 130 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 SLC41A3Q96GZ6 507 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 MPP4Q96JB8 637 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 DHRS9Q9BPW9 319 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 GPR35Q9HC97 309 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 B3GAT2Q9NPZ5 323 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 USP22Q9UPT9 525 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 NOX1Q9Y5S8 564 aa12.08□□□□□ -0.48
PNKP-228ENST00000637325 TRIM64A6NGJ6 449 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 TRIM64BA6NI03 449 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 FAM171A2A8MVW0 826 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 E7EQL1 145 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 C11orf98E9PRG8 122 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 M0R3G1 203 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 OVOL3O00110 214 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 KPNA4O00629 521 aaPredicted RBP12.07□□□□□ -0.48
PNKP-228ENST00000637325 PLPP3O14495 311 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 TRAF3IP2O43734 574 aaPredicted RBP12.07□□□□□ -0.48
PNKP-228ENST00000637325 CH25HO95992 272 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 HPRP00739 348 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 ADORA3P0DMS8 318 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 UMPSP11172 480 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 COX4I1P13073 169 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 HLA-DOBP13765 273 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 HOXB1P14653 301 aaPredicted RBP12.07□□□□□ -0.48
PNKP-228ENST00000637325 ARF1P84077 181 aaKnown RBP12.07□□□□□ -0.48
PNKP-228ENST00000637325 LRRC23Q53EV4 343 aaPredicted RBP12.07□□□□□ -0.48
PNKP-228ENST00000637325 WDR88Q6ZMY6 472 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms