RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 RNF6Q9Y252 685 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 CBY1Q9Y3M2 126 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 LAMA5O15230 3695 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 SHANK1Q9Y566 2161 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 PCSK5Q92824 1860 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 KCNE1BA0A087WTH5 132 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 F8VVB4 439 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 F8VWA3 439 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 H7C0C1 242 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 C19orf84I3L1E1 186 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 APOC4-APOC2K7ER74 178 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 LSM1O15116 133 aaKnown RBP3.43□□□□□ -1.86
CLN5-214ENST00000636705 NBR2O15453 112 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 HCN1O60741 890 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 CST1P01037 141 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 APOC2P02655 101 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 CATP04040 527 aaKnown RBP3.43□□□□□ -1.86
CLN5-214ENST00000636705 CD48P09326 243 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 PDHA2P29803 388 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 CYLC1P35663 651 aaPredicted RBP3.43□□□□□ -1.86
CLN5-214ENST00000636705 PIGAP37287 484 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 SOX2P48431 317 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 NR0B1P51843 470 aaKnown RBP3.43□□□□□ -1.86
CLN5-214ENST00000636705 RPS15AP62244 130 aaKnown RBP3.43□□□□□ -1.86
CLN5-214ENST00000636705 BIKQ13323 160 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 RCAN2Q14206 197 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 NPTX1Q15818 432 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 TTLL9Q3SXZ7 439 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 ZNF658BQ4V348 819 aaPredicted RBP3.43□□□□□ -1.86
CLN5-214ENST00000636705 PDZK1Q5T2W1 519 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 FAM69BQ5VUD6 431 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 PTRHD1Q6GMV3 140 aaKnown RBP3.43□□□□□ -1.86
CLN5-214ENST00000636705 KCNIP4Q6PIL6 250 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 PAMR1Q6UXH9 720 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 C4orf22Q6V702 233 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 TMEM156Q8N614 296 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 OR2L3Q8NG85 312 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 ANGPTL6Q8NI99 470 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 FLVCR1-AS1Q8TAF5 88 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 SCARB1Q8WTV0 552 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 SSMEM1Q8WWF3 244 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 COQ8BQ96D53 544 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 CXorf58Q96LI9 332 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 DUX5Q96PT3 197 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 QKIQ96PU8 341 aaKnown RBP eCLIP3.43□□□□□ -1.86
CLN5-214ENST00000636705 MACROD1Q9BQ69 325 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 TRIM51Q9BSJ1 452 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 HINT2Q9BX68 163 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 DEFB126Q9BYW3 111 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 HIPK2Q9H2X6 1198 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 PNO1Q9NRX1 252 aaKnown RBP3.43□□□□□ -1.86
CLN5-214ENST00000636705 DDX28Q9NUL7 540 aaKnown RBP3.43□□□□□ -1.86
CLN5-214ENST00000636705 FAM53CQ9NYF3 392 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 NPAP1Q9NZP6 1156 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 ZNF629Q9UEG4 869 aaPredicted RBP3.43□□□□□ -1.86
CLN5-214ENST00000636705 ARL5AQ9Y689 179 aa3.43□□□□□ -1.86
CLN5-214ENST00000636705 SIRT4Q9Y6E7 314 aaPredicted RBP3.43□□□□□ -1.86
CLN5-214ENST00000636705 ARHGEF17Q96PE2 2063 aaPredicted RBP3.42□□□□□ -1.86
CLN5-214ENST00000636705 A0A0J9YVX5 310 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 SNTNA6NMZ2 147 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 NR5A2O00482 541 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 GAPDHSO14556 408 aaPredicted RBP3.42□□□□□ -1.86
CLN5-214ENST00000636705 PRMT5O14744 637 aaPredicted RBP3.42□□□□□ -1.86
CLN5-214ENST00000636705 SLC16A5O15375 505 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 ZSCAN12O43309 604 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 PEX1O43933 1283 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 CST8O60676 142 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 CYP7B1O75881 506 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 CRYGBP07316 175 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 SAGP10523 405 aaPredicted RBP3.42□□□□□ -1.86
CLN5-214ENST00000636705 NAGAP17050 411 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 LAP3P28838 519 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 SRD5A2P31213 254 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 DCTDP32321 178 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 CD80P33681 288 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 SLC6A8P48029 635 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 PCYT1AP49585 367 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 ZNF140P52738 457 aaPredicted RBP3.42□□□□□ -1.86
CLN5-214ENST00000636705 OR4D2P58180 307 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 CD81P60033 236 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 KRTAP10-9P60411 292 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 MAT1AQ00266 395 aaKnown RBP3.42□□□□□ -1.86
CLN5-214ENST00000636705 PLGLB1Q02325 96 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 PRDX1Q06830 199 aaKnown RBP3.42□□□□□ -1.86
CLN5-214ENST00000636705 ZNF415Q09FC8 603 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 PMPCAQ10713 525 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 MESDQ14696 234 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 NSDHLQ15738 373 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 MRPL23Q16540 153 aaKnown RBP3.42□□□□□ -1.86
CLN5-214ENST00000636705 FBXL19-AS1Q494R0 122 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 LINC01620Q4KN68 170 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 XKR7Q5GH72 579 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 C6orf183Q5T699 404 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 UGT3A1Q6NUS8 523 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 LRRC8BQ6P9F7 803 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 SHISA6Q6ZSJ9 500 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 ADGRG3Q86Y34 549 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 CHERPQ8IWX8 916 aaKnown RBP3.42□□□□□ -1.86
CLN5-214ENST00000636705 ZNF567Q8N184 647 aa3.42□□□□□ -1.86
CLN5-214ENST00000636705 FAM47BQ8NA70 645 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms