RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 FGFBP1Q14512 234 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM119Q4V9L6 283 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM107Q6UX40 140 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF620Q6ZNG0 422 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 LRRTM1Q86UE6 522 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 OR1L1Q8NH94 360 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 BORCS6Q96GS4 357 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SEC22AQ96IW7 307 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 AQP10Q96PS8 301 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 NXT1Q9UKK6 140 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 HSPE1-MOB4S4R3N1 261 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 TRAV18A0A075B6X5 111 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 NUDT21O43809 227 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 PIAS1O75925 651 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 RAB40ALP0C0E4 278 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 CNR1P21554 472 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SOX3P41225 446 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 MTCP1P56278 107 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 EDDM3BP56851 147 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 KIAA1024LP59773 190 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 LCN10Q6JVE6 187 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 OR10K1Q8NGX5 313 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 FAM213BQ8TBF2 198 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 RAB40AQ8WXH6 277 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 KCNA7Q96RP8 456 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 ESRP2Q9H6T0 727 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 DDX4Q9NQI0 724 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 BABAM2Q9NXR7 383 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 HHLA2Q9UM44 414 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 GABRQQ9UN88 632 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 PTRH2Q9Y3E5 179 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 RFXAPO00287 272 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 CILPO75339 1184 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 DRD1P21728 446 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 MYF6P23409 242 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 EIF1P41567 113 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 GPR12P47775 334 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 DCAF7P61962 342 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 NHLH1Q02575 133 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 NHLH2Q02577 135 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 MBTPS1Q14703 1052 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 ALKBH6Q3KRA9 238 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF343Q6P1L6 599 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 TSPYL5Q86VY4 417 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 DEFB119Q8N690 84 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 FAM71F1Q96KD3 344 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 MRPL37Q9BZE1 423 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 PURGQ9UJV8 347 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 INTS6Q9UL03 887 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 RAB22AQ9UL26 194 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 LRRC7Q96NW7 1537 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 RGPD1P0DJD0 1748 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 PDCD11Q14690 1871 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SLC22A20A6NK97 555 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 A8MV72 311 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 KLF8O95600 359 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 HPRP00739 348 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 ETV1P50549 477 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 RPL7AP62424 266 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SLC35A1P78382 337 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SLC35G1Q2M3R5 365 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 DEFB134Q4QY38 66 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM139Q8IV31 216 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 LYSMD2Q8IV50 215 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SLC38A6Q8IZM9 456 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 GATSQ8NAP1 163 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 GPR150Q8NGU9 434 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 OR2T35Q8NGX2 323 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 OR5R1Q8NH85 324 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 DYNC2LI1Q8TCX1 351 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 EXTL1Q92935 676 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 ZBTB45Q96K62 511 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 ADAMTS10Q9H324 1103 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 OR51J1Q9H342 316 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 NMNAT1Q9HAN9 279 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 ZDHHC7Q9NXF8 308 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 I6L893 689 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 DDNO94850 711 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 NDUFB2O95178 105 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 TSPAN13O95857 204 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 CTXN2P0C2S0 81 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 HIST1H1BP16401 226 aaKnown RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 G6PCP35575 357 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 DLX1P56177 255 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 DLX5P56178 289 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 MEP1AQ16819 746 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 GLYR1Q49A26 553 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 Q6ZN92 141 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 ADAMTS13Q76LX8 1427 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SFTPA2Q8IWL1 248 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SFTPA1Q8IWL2 248 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 SLC35F2Q8IXU6 374 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 C11orf40Q8WZ69 217 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM230Q96A57 120 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 TECTBQ96PL2 329 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 CIB3Q96Q77 187 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 CHRNA10Q9GZZ6 450 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 DDTLA6NHG4 134 aaPredicted RBP5.62□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM212A6NML5 194 aa5.62□□□□□ -1.51
SCN1A-212ENST00000636194 PCMT1P22061 227 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms