RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 SUPT7LO94864 414 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 OLFM2O95897 454 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 JCHAINP01591 159 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 IGHDP01880 384 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 KRT6AP02538 564 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 KRT6BP04259 564 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ALPPP05187 535 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 CD55P08174 381 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 POLR2MP0CAP2 368 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ALPPL2P10696 532 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 HLA-EP13747 358 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF17P17021 662 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ARF4P18085 180 aaPredicted RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 SERPINA2P20848 420 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ATP6V1B2P21281 511 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ZP3P21754 424 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 GLRA2P23416 452 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 PTPN6P29350 595 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 CASP1P29466 404 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 UGT1A5P35504 534 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 RPL29P47914 159 aaKnown RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 KRT6CP48668 564 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 GMFBP60983 142 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 MRPS11P82912 194 aaKnown RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 OTUD4Q01804 1114 aaKnown RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TLE4Q04727 773 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 LRRC63Q05C16 580 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 CCDC173Q0VFZ6 552 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ST3GAL3Q11203 375 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TWF1Q12792 350 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ZP4Q12836 540 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 PSG7Q13046 419 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF154Q13106 437 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 DNAJC3Q13217 504 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 CUL1Q13616 776 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ELAVL3Q14576 367 aaKnown RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 LASP1Q14847 261 aaKnown RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TRIP10Q15642 601 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 CHI3L2Q15782 390 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 MAPK6Q16659 721 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ACSF3Q4G176 576 aaPredicted RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF658BQ4V348 819 aaPredicted RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 CYBRD1Q53TN4 286 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 DNAJC21Q5F1R6 531 aaKnown RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 OR2B11Q5JQS5 317 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 FAM78AQ5JUQ0 283 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 PPM1LQ5SGD2 360 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 SPATA46Q5T0L3 261 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 LIN9Q5TKA1 542 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 OTPQ5XKR4 325 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 RAB12Q6IQ22 244 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 IRGCQ6NXR0 463 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 FAM159AQ6UWV7 190 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 CD300LGQ6UXG3 332 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ISLR2Q6UXK2 745 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF562Q6V9R5 426 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 WASH2PQ6VEQ5 465 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 LANCL3Q6ZV70 420 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ARCQ7LC44 396 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 CATSPER4Q7RTX7 472 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 HSD11B1LQ7Z5J1 315 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 RABEPKQ7Z6M1 372 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 LCA5Q86VQ0 697 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 MISPQ8IVT2 679 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 EFCAB13Q8IY85 973 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 KDM8Q8N371 416 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 GPR137CQ8N3F9 429 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 NECAB1Q8N987 351 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 Q8N9W7 124 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 NFAM1Q8NET5 270 aaPredicted RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 BBS1Q8NFJ9 593 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 OR2AP1Q8NGE2 309 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 OR9A1PQ8NGU1 263 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 WFDC5Q8TCV5 224 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 PDCD6IPQ8WUM4 868 aaKnown RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 SLC13A3Q8WWT9 602 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 SELENOMQ8WWX9 145 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TAF4BQ92750 862 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 FGF13Q92913 245 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 UPRTQ96BW1 309 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 HAVCR1Q96D42 359 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 CCDC51Q96ER9 411 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF799Q96GE5 643 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TMEM80Q96HE8 168 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 VSTM2LQ96N03 204 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 OR5B2Q96R09 309 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 IL4I1Q96RQ9 567 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF184Q99676 751 aaPredicted RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 EBF4Q9BQW3 602 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 LXNQ9BS40 222 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 DPH7Q9BTV6 452 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TBCDQ9BTW9 1192 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 C19orf24Q9BVV8 132 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 SPATA16Q9BXB7 569 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TEKT3Q9BXF9 490 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TBC1D10AQ9BXI6 508 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 COMMD4Q9H0A8 199 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 TMEM117Q9H0C3 514 aa0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 SUDS3Q9H7L9 328 aaPredicted RBP0.75□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF702PQ9H963 129 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms