RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 C17orf112F2Z3M2 114 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 IGHV3-9P01782 118 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 RAB40ALP0C0E4 278 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 LINC00346Q8IVM7 164 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 RAB40AQ8WXH6 277 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 BCL7BQ9BQE9 202 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 C1orf123Q9NWV4 160 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 USP3Q9Y6I4 520 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 H3BMQ9 156 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 MED6O75586 246 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 CHRNB1P11230 501 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 BLVRBP30043 206 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-211ENST00000629427 MRPS10P82664 201 aaKnown RBP10.89□□□□□ -0.67
SHPRH-211ENST00000629427 CAMK2BQ13554 666 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 KCNIP4Q6PIL6 250 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 RFLNAQ6ZTI6 216 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 NCCRP1Q6ZVX7 275 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-211ENST00000629427 METTL4Q8N3J2 472 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 ADAMTS5Q9UNA0 930 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 TOPAZ1Q8N9V7 1692 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 FBXO24O75426 580 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 KIR2DL3P43628 341 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 EXT1Q16394 746 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 PM20D2Q8IYS1 436 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 OR6T1Q8NGN1 323 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 SLC38A5Q8WUX1 472 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 TCTEX1D2Q8WW35 142 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 ANKRD60Q9BZ19 345 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 C1GALT1Q9NS00 363 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 PGAP2Q9UHJ9 254 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 H7C1Q1 480 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 EFSO43281 561 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 CLDN1O95832 211 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 ADRA1AP35348 466 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 CYP4V2Q6ZWL3 525 aaPredicted RBP10.89□□□□□ -0.67
SHPRH-211ENST00000629427 OVCH1Q7RTY7 1134 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 FNDC8Q8TC99 324 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 ZFAND2BQ8WV99 257 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 GIMAP1Q8WWP7 306 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 BOD1Q96IK1 185 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 LANCL2Q9NS86 450 aa10.89□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF732B4DXR9 585 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF814B7Z6K7 855 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 RPL35P42766 123 aaKnown RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 RACK1P63244 317 aaKnown RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 MFGE8Q08431 387 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 MFAP5Q13361 173 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 SIRT6Q8N6T7 355 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 ABHD11Q8NFV4 315 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 TFAP2CQ92754 450 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 SMCO4Q9NRQ5 59 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 TRIP12Q14669 1992 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 EIF1BO60739 113 aaKnown RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 AGFG1P52594 562 aaKnown RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 GNB1P62873 340 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 RNF4P78317 190 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 ZNF74Q16587 644 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 GDPD3Q7L5L3 318 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 OR2T27Q8NH04 317 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 EMG1Q92979 244 aaKnown RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 SLA2Q9H6Q3 261 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 WDR76Q9H967 626 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 GALNT9Q9HCQ5 603 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 SMCHD1A6NHR9 2005 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 PRKRAO75569 313 aaKnown RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 ADAMTSL4Q6UY14 1074 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 CBLL1Q75N03 491 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 B3GNT8Q7Z7M8 397 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 ZFP82Q8N141 532 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 FBXO27Q8NI29 283 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 ELP4Q96EB1 424 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 GLTPQ9NZD2 209 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 TRAV36DV7A0A075B6V5 113 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 SULT1C2O00338 296 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 OR7A17O14581 309 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 IMPA1P29218 277 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 OGFOD3Q6PK18 319 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 FJX1Q86VR8 437 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 CMIPQ8IY22 773 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 ADGRG5Q8IZF4 528 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 ST7LQ8TDW4 575 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 UHRF2Q96PU4 802 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 HS3ST1O14792 307 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 TGM4P49221 684 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 GPR19Q15760 415 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 MARCH3Q86UD3 253 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 FRMD1Q8N878 549 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 TNFRSF13CQ96RJ3 184 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 ADAM29Q9UKF5 820 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 HS3ST2Q9Y278 367 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 CRYM-AS1A6NIL9 109 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 ACOD1A6NK06 481 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 PRPH2P23942 346 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 EIF1P41567 113 aaKnown RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 GNB2P62879 340 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 MC2RQ01718 297 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 MLLT11Q13015 90 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 C6orf15Q6UXA7 325 aaPredicted RBP10.88□□□□□ -0.67
SHPRH-211ENST00000629427 BHLHE23Q8NDY6 225 aa10.88□□□□□ -0.67
SHPRH-211ENST00000629427 OR13H1Q8NG92 308 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms