RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 BCO1Q9HAY6 547 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 VNN3Q9NY84 501 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 AP4S1Q9Y587 144 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 U3KQV3 271 aa13.08□□□□□ -0.32
PNKP-221ENST00000627317 ZNF724A8MTY0 619 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 DEAF1O75398 565 aaPredicted RBP13.07□□□□□ -0.32
PNKP-221ENST00000627317 E2F6O75461 281 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 TIPRLO75663 272 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 TNFSF13O75888 250 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 SMNDC1O75940 238 aaKnown RBP eCLIP13.07□□□□□ -0.32
PNKP-221ENST00000627317 ASAH2BP0C7U1 165 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 ADORA3P0DMS8 318 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 FCGR1AP12314 374 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 MAKP20794 623 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 KIR2DL2P43627 348 aaPredicted RBP13.07□□□□□ -0.32
PNKP-221ENST00000627317 C1DQ13901 141 aaKnown RBP13.07□□□□□ -0.32
PNKP-221ENST00000627317 GK3PQ14409 553 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 SLC17A1Q14916 467 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 FBXL19-AS1Q494R0 122 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 VWA1Q6PCB0 445 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 GALNT5Q7Z7M9 940 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 LINC00471Q8N535 108 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 LRRC17Q8N6Y2 441 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 ZNF775Q96BV0 537 aaPredicted RBP13.07□□□□□ -0.32
PNKP-221ENST00000627317 DUS3LQ96G46 650 aaKnown RBP13.07□□□□□ -0.32
PNKP-221ENST00000627317 PIGMQ9H3S5 423 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 DENND2DQ9H6A0 471 aaPredicted RBP13.07□□□□□ -0.32
PNKP-221ENST00000627317 C12orf49Q9H741 205 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 ARMC1Q9NVT9 282 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 DNAJB9Q9UBS3 223 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 ING1Q9UK53 422 aaPredicted RBP13.07□□□□□ -0.32
PNKP-221ENST00000627317 PROCRQ9UNN8 238 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 NOSIPQ9Y314 301 aaKnown RBP13.07□□□□□ -0.32
PNKP-221ENST00000627317 CACNA1DQ01668 2161 aa13.07□□□□□ -0.32
PNKP-221ENST00000627317 HRNRQ86YZ3 2850 aaPredicted RBP13.06□□□□□ -0.32
PNKP-221ENST00000627317 ANKRD65E5RJM6 399 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 C11orf98E9PRG8 122 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 BLOC1S5-TXNDC5H3BN57 136 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 PLPP3O14495 311 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 SERPINI2O75830 405 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 CCNB2O95067 398 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 ZNF43P17038 809 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 AHCYP23526 432 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 SSTR2P30874 369 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 LIMS1P48059 325 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 HMGA2P52926 109 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 PPP1R8Q12972 351 aaKnown RBP13.06□□□□□ -0.32
PNKP-221ENST00000627317 POU4F3Q15319 338 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 ZFP1Q6P2D0 407 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 CASP12Q6UXS9 341 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 TMPRSS11FQ6ZWK6 438 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 BTLAQ7Z6A9 289 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 OAFQ86UD1 273 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 UEVLDQ8IX04 471 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 KDM8Q8N371 416 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 OR4C15Q8NGM1 316 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 OR13C2Q8NGS9 318 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 LIPHQ8WWY8 451 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 PYDC1Q8WXC3 89 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 OXGR1Q96P68 337 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 NDEL1Q9GZM8 345 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 JKAMPQ9P055 326 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 NOX1Q9Y5S8 564 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 FLVCR1Q9Y5Y0 555 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 HCFC1P51610 2035 aa13.06□□□□□ -0.32
PNKP-221ENST00000627317 CLOCKO15516 846 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 RNF13O43567 381 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 AKAP8O43823 692 aaKnown RBP13.05□□□□□ -0.32
PNKP-221ENST00000627317 HPRP00739 348 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 FASP25445 335 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 DNAJA1P31689 397 aaKnown RBP13.05□□□□□ -0.32
PNKP-221ENST00000627317 OMPP47874 163 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 SLC9A3P48764 834 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 ASCL1P50553 236 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 IST1P53990 364 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 KRTAP10-9P60411 292 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 POU3F1Q03052 451 aaPredicted RBP13.05□□□□□ -0.32
PNKP-221ENST00000627317 LAPTM4AQ15012 233 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 NUFIP2Q7Z417 695 aaKnown RBP13.05□□□□□ -0.32
PNKP-221ENST00000627317 STK32CQ86UX6 486 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 ZNF100Q8IYN0 542 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 ANKK1Q8NFD2 765 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 OR9Q2Q8NGE9 314 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 STMN2Q93045 179 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 STARD4Q96DR4 205 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 LURAP1Q96LR2 239 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 B3GAT1Q9P2W7 334 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 CELSR1Q9NYQ6 3014 aa13.05□□□□□ -0.32
PNKP-221ENST00000627317 TRAV27A0A087WT01 109 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 LOC102725191A0A1B0GVB3 256 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 UNC119BA6NIH7 251 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 MS4A18H0YCH9 400 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 CDC42EP2O14613 210 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 MSTNO14793 375 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 MRPL33O75394 65 aaKnown RBP13.04□□□□□ -0.32
PNKP-221ENST00000627317 CD8BP10966 210 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 UQCRC1P31930 480 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 AQP2P41181 271 aa13.04□□□□□ -0.32
PNKP-221ENST00000627317 RPL18Q07020 188 aaKnown RBP13.04□□□□□ -0.32
PNKP-221ENST00000627317 ZP4Q12836 540 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms