RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 MFSD13AQ14CX5 517 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 NTRK2Q16620 822 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 STEAP3Q658P3 488 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 RPL22L1Q6P5R6 122 aaKnown RBP19.96■□□□□ 0.79
PNKP-220ENST00000627232 FAM199XQ6PEV8 388 aaPredicted RBP19.96■□□□□ 0.79
PNKP-220ENST00000627232 RFLNBQ8N5W9 214 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 TEX19Q8NA77 164 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 ABHD4Q8TB40 342 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 THAP4Q8WY91 577 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 SLC25A36Q96CQ1 311 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 PELI1Q96FA3 418 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 MNTQ99583 582 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 SDHCQ99643 169 aaPredicted RBP19.96■□□□□ 0.79
PNKP-220ENST00000627232 ULBP3Q9BZM4 244 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 MIXL1Q9H2W2 232 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 ABCB9Q9NP78 766 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 MRPL39Q9NYK5 338 aaKnown RBP19.96■□□□□ 0.79
PNKP-220ENST00000627232 KLRF1Q9NZS2 232 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 AKAP7Q9P0M2 348 aaPredicted RBP19.96■□□□□ 0.79
PNKP-220ENST00000627232 V9GYH0 126 aa19.96■□□□□ 0.79
PNKP-220ENST00000627232 TRIM3O75382 744 aaPredicted RBP19.95■□□□□ 0.78
PNKP-220ENST00000627232 SC5DO75845 299 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 OR2J2O76002 312 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 DKK1O94907 266 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 SERPINA3P01011 423 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 UMODP07911 640 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 GRPRP30550 384 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 RPL27P61353 136 aaKnown RBP19.95■□□□□ 0.78
PNKP-220ENST00000627232 PPP3R1P63098 170 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 SIRPAP78324 504 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 SLC3A1Q07837 685 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 INSL4Q14641 139 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 CDK5R1Q15078 307 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 EXT1Q16394 746 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 SLC25A53Q5H9E4 307 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 FAM69BQ5VUD6 431 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 PAMR1Q6UXH9 720 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 SLC22A16Q86VW1 577 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 FAM83FQ8NEG4 500 aaPredicted RBP19.95■□□□□ 0.78
PNKP-220ENST00000627232 RHBDD1Q8TEB9 315 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 ETAA1Q9NY74 926 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 PPP4R1LQ9P1A2 415 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 COPS3Q9UNS2 423 aa19.95■□□□□ 0.78
PNKP-220ENST00000627232 PTRH2Q9Y3E5 179 aaKnown RBP19.95■□□□□ 0.78
PNKP-220ENST00000627232 IGHV1-45A0A0A0MS14 117 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 SHISA3A0PJX4 238 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 C4orf47A7E2U8 309 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 FTCDNL1E5RQL4 147 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 PLPP3O14495 311 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 ZNF208O43345 1280 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 GTF2E2P29084 291 aaKnown RBP19.94■□□□□ 0.78
PNKP-220ENST00000627232 PTGDSP41222 190 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 PSMD7P51665 324 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 CDC20Q12834 499 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 BTBD16Q32M84 506 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 EEF1A1P5Q5VTE0 462 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 MZT2AQ6P582 158 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 KCTD20Q7Z5Y7 419 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 PXKQ7Z7A4 578 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 TPRA1Q86W33 373 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 HAVCR2Q8TDQ0 301 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 SMIM19Q96E16 107 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 SPACA9Q96E40 222 aaPredicted RBP19.94■□□□□ 0.78
PNKP-220ENST00000627232 RASL10BQ96S79 203 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 TXNIPQ9H3M7 391 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 GALNT9Q9HCQ5 603 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 MED11Q9P086 117 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 B3GALT1Q9Y5Z6 326 aa19.94■□□□□ 0.78
PNKP-220ENST00000627232 XKRYO14609 159 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 KLF7O75840 302 aaPredicted RBP19.93■□□□□ 0.78
PNKP-220ENST00000627232 OR6A2O95222 327 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 CD63P08962 238 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 BCAP31P51572 246 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 DEFA1P59665 94 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 DEFA3P59666 94 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 ANGPT1Q15389 498 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 ZNF684Q5T5D7 378 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 OR5M10Q6IEU7 315 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 TCEAL6Q6IPX3 200 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 RPTNQ6XPR3 784 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 TIGD4Q8IY51 512 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 OR2Y1Q8NGV0 311 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 MFSD8Q8NHS3 518 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 ZNF519Q8TB69 540 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 M1APQ8TC57 530 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 ACOT12Q8WYK0 555 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 GHSRQ92847 366 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 TCEAL3Q969E4 200 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 KIAA1143Q96AT1 154 aaPredicted RBP19.93■□□□□ 0.78
PNKP-220ENST00000627232 IMMP1LQ96LU5 166 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 CMKLR1Q99788 373 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 ATF6BQ99941 703 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 RNF32Q9H0A6 362 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 MARCH7Q9H992 704 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 GNG8Q9UK08 70 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 GRIP1Q9Y3R0 1128 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 WIF1Q9Y5W5 379 aa19.93■□□□□ 0.78
PNKP-220ENST00000627232 FUOMA2VDF0 154 aa19.92■□□□□ 0.78
PNKP-220ENST00000627232 C2orf72A6NCS6 295 aa19.92■□□□□ 0.78
PNKP-220ENST00000627232 C11orf98E9PRG8 122 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms