RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ENO4A6NNW6 628 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 PLPP3O14495 311 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 ATP5HO75947 161 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 OR7A10O76100 309 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 CH25HO95992 272 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 THY1P04216 161 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 ASAH2BP0C7U1 165 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 ADORA3P0DMS8 318 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 NR2C1P13056 603 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 IGHV1-2P23083 117 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 AHCYP23526 432 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 DNAJA1P31689 397 aaKnown RBP12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 CLDN17P56750 224 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 POU3F1Q03052 451 aaPredicted RBP12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 FAPQ12884 760 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 DGCR6Q14129 220 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 STK11Q15831 433 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 NIPAL3Q6P499 406 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 WDR88Q6ZMY6 472 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 P3H2Q8IVL5 708 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 GPR137CQ8N3F9 429 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 ZNF433Q8N7K0 673 aaPredicted RBP12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 ZIC4Q8N9L1 334 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 NINJ1Q92982 152 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 LRR1Q96L50 414 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 MOGAT1Q96PD6 335 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 ZNF385AQ96PM9 386 aaKnown RBP12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 ZNF347Q96SE7 839 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 ESRP2Q9H6T0 727 aaKnown RBP12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 SLC7A10Q9NS82 523 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 B3GAT1Q9P2W7 334 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 AMDHD2Q9Y303 409 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 TEX15Q9BXT5 2789 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 FREM1Q5H8C1 2179 aa12.36□□□□□ -0.43
SNRPA1-216ENST00000626000 APCP25054 2843 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 NPIPB13A6NJU9 1138 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 CENPBD1B2RD01 187 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 NPIPB4C9JG80 1138 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 PDLIM1O00151 329 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 KPNA4O00629 521 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 TRAF3IP2O43734 574 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 LYZL6O75951 148 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 HRGP04196 525 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 H1F0P07305 194 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 HOXB1P14653 301 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 SLC9A3P48764 834 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 DAP3P51398 398 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 SNTB1Q13884 538 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 TRIM25Q14258 630 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 PPA1Q15181 289 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 TSPO2Q5TGU0 170 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 HMBOX1Q6NT76 420 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 KLHL17Q6TDP4 642 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 ZNF730Q6ZMV8 503 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 CCDC36Q8IYA8 594 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 TMEM255BQ8WV15 326 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 BPIFA2Q96DR5 249 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 ASB9Q96DX5 294 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 RADILQ96JH8 1075 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 LRGUKQ96M69 825 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 MUS81Q96NY9 551 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 PIP5K1AQ99755 562 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 MAGIXQ9H6Y5 334 aa12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 NMNAT1Q9HAN9 279 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 MEPEQ9NQ76 525 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 GMPR2Q9P2T1 348 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-216ENST00000626000 A0A1W2PRG6 482 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 CYSRT1A8MQ03 144 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 MS4A18H0YCH9 400 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 RPL36A-HNRNPH2H7BZ11 118 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 GYG2O15488 501 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 RNF13O43567 381 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 ZNF432O94892 652 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 WNT11O96014 354 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 IGHV3-9P01782 118 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 FABP3P05413 133 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 T-ENOLP0DO92 83 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 FUT1P19526 365 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 IFNGR2P38484 337 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 UGT2B15P54855 530 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 LTBQ06643 244 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 MS4A18Q3C1V0 323 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 ANKRD34AQ69YU3 496 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 LCN8Q6JVE9 175 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 MBOAT2Q6ZWT7 520 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 CDH24Q86UP0 819 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 TSPYL5Q86VY4 417 aaPredicted RBP12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 DHFR2Q86XF0 187 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 CDC20BQ86Y33 519 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 WFDC8Q8IUA0 241 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 NKAIN4Q8IVV8 208 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 FAM156AQ8NDB6 213 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 OR6X1Q8NH79 312 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 FNDC8Q8TC99 324 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 MAGEE2Q8TD90 523 aaPredicted RBP12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 ZC3HAV1LQ96H79 300 aaKnown RBP12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 IL1RAPQ9NPH3 570 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 TAS2R1Q9NYW7 299 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 NDUFAF4Q9P032 175 aa12.34□□□□□ -0.43
SNRPA1-216ENST00000626000 DCHS2Q6V1P9 2916 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms