RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 TMEM43Q9BTV4 400 aa9.47□□□□□ -0.89
SSBP4-215ENST00000625926 ASPNQ9BXN1 380 aa9.47□□□□□ -0.89
SSBP4-215ENST00000625926 CACNG6Q9BXT2 260 aa9.47□□□□□ -0.89
SSBP4-215ENST00000625926 REG4Q9BYZ8 158 aa9.47□□□□□ -0.89
SSBP4-215ENST00000625926 MOV10Q9HCE1 1003 aaKnown RBP9.47□□□□□ -0.89
SSBP4-215ENST00000625926 GDF2Q9UK05 429 aaPredicted RBP9.47□□□□□ -0.89
SSBP4-215ENST00000625926 ARPC4-TTLL3A0A0A6YYG9 625 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 RNF223E7ERA6 249 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 ATP6V1G2-DDX39BF2Z307 99 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 MS4A18H0YCH9 400 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 M0R3H8 397 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 FBP2O00757 339 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 SSX4O60224 188 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 MT-ATP6P00846 226 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 NPPAP01160 153 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 BGLAPP02818 100 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 APOBEC3AP31941 199 aaPredicted RBP9.46□□□□□ -0.9
SSBP4-215ENST00000625926 PCGF2P35227 344 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 ARFIP2P53365 341 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 ARF1P84077 181 aaKnown RBP9.46□□□□□ -0.9
SSBP4-215ENST00000625926 CHRNB3Q05901 458 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 PMS2P3Q13401 168 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 RAB35Q15286 201 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 VMACQ2NL98 169 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 TRMT5Q32P41 509 aaKnown RBP9.46□□□□□ -0.9
SSBP4-215ENST00000625926 MS4A18Q3C1V0 323 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 MMEL1Q495T6 779 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 COQ5Q5HYK3 327 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 C11orf71Q6IPW1 123 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 NANOGP8Q6NSW7 305 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 LINC00114Q6XXX2 140 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 FAM169BQ8N8A8 192 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 GPR32P1Q8NGA4 272 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 OR6T1Q8NGN1 323 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 RASSF5Q8WWW0 418 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 SLC38A2Q96QD8 506 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 OR2M2Q96R28 347 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 KCNS3Q9BQ31 491 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 NANOGQ9H9S0 305 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 CRLF2Q9HC73 371 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 GPR35Q9HC97 309 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 MRPL39Q9NYK5 338 aaKnown RBP9.46□□□□□ -0.9
SSBP4-215ENST00000625926 MOKQ9UQ07 419 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 NBEAL1Q6ZS30 2694 aa9.46□□□□□ -0.9
SSBP4-215ENST00000625926 IGHV1-18A0A0C4DH31 117 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 CPSF4LA6NMK7 179 aaKnown RBP9.45□□□□□ -0.9
SSBP4-215ENST00000625926 ZNF726A6NNF4 738 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 TRAF3IP2O43734 574 aaPredicted RBP9.45□□□□□ -0.9
SSBP4-215ENST00000625926 CHP2O43745 196 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 HPRP00739 348 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 CRYAAP02489 173 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 VIMP08670 466 aaKnown RBP9.45□□□□□ -0.9
SSBP4-215ENST00000625926 AHCYP23526 432 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 GZMMP51124 257 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 NUDT6P53370 316 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 DSCR9P59020 149 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 PPP2R2BQ00005 443 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 POU3F1Q03052 451 aaPredicted RBP9.45□□□□□ -0.9
SSBP4-215ENST00000625926 PUDPQ08623 228 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 KLF10Q13118 480 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 MAPRE2Q15555 327 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 NPTX1Q15818 432 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 CEACAM16Q2WEN9 425 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 C3orf36Q3SXR2 165 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 ENTPD8Q5MY95 495 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 TTC33Q6PID6 262 aaPredicted RBP9.45□□□□□ -0.9
SSBP4-215ENST00000625926 DNM1P46Q6ZS02 220 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 CCDC80Q76M96 950 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 PXKQ7Z7A4 578 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 CCDC36Q8IYA8 594 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 C20orf196Q8IYI0 205 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 TMEM123Q8N131 208 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 OR8J3Q8NGG0 315 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 VANGL1Q8TAA9 524 aaPredicted RBP9.45□□□□□ -0.9
SSBP4-215ENST00000625926 TAMM41Q96BW9 452 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 LRRC58Q96CX6 371 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 MOGAT1Q96PD6 335 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 ECSITQ9BQ95 431 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 RHNO1Q9BSD3 238 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 KATNB1Q9BVA0 655 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 FGFR1OP2Q9NVK5 253 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 CRNNQ9UBG3 495 aaPredicted RBP9.45□□□□□ -0.9
SSBP4-215ENST00000625926 NOX1Q9Y5S8 564 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 PMF1-BGLAPU3KQ54 211 aa9.45□□□□□ -0.9
SSBP4-215ENST00000625926 LOC100653049A0A140TA62 436 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 SLC35F4A4IF30 521 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 TRAPPC13A5PLN9 417 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 BBIP1A8MTZ0 92 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 LRRN3E7EW58 273 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 H7C417 338 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 M0R3G1 203 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 PLPP3O14495 311 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 KRT34O76011 436 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 OR6A2O95222 327 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 HLA-DOBP13765 273 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 CBR1P16152 277 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 CD247P20963 164 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 PCSK6P29122 969 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 TUBA1BP68363 451 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 TUBA4AP68366 448 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms