RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 Q7L0L9 218 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 HIST3H2AQ7L7L0 130 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 NANOGNBQ7Z5D8 188 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 KCTD20Q7Z5Y7 419 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 PLXDC1Q8IUK5 500 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 YIPF7Q8N8F6 280 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 ZNF511Q8NB15 262 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 OR4D9Q8NGE8 314 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 OR1L3Q8NH93 324 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 HIST1H2ACQ93077 130 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 ZNF524Q96C55 264 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 KTI12Q96EK9 354 aaPredicted RBP7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 CMTM3Q96MX0 182 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 TSSK2Q96PF2 358 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 NUDT9Q9BW91 350 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 NOX4Q9NPH5 578 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 PAQR5Q9NXK6 330 aaPredicted RBP7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 SPATA2Q9UM82 520 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 CLEC4AQ9UMR7 237 aa7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 MRPS17Q9Y2R5 130 aaKnown RBP7.57□□□□□ -1.2
SND1-IT1-201ENST00000623342 A0A0B4J203 849 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 OR6C70A6NIJ9 312 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 PRR32B1ATL7 298 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 IDSB3KWA1 339 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 PSMD9O00233 223 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 HCRTR2O43614 444 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 NANOS3P60323 173 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 RRAS2P62070 204 aaPredicted RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 ZP2Q05996 745 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 EBPQ15125 230 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 NTRK2Q16620 822 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 SLC36A2Q495M3 483 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 SNAP47Q5SQN1 464 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 PRAMEF17Q5VTA0 474 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 KRT74Q7RTS7 529 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 FAM220AQ7Z4H9 259 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 ASCC1Q8N9N2 400 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 OR2T4Q8NH00 348 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 C1orf216Q8TAB5 229 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 ZNF671Q8TAW3 534 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 HAVCR2Q8TDQ0 301 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 DAZLQ92904 295 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 YIPF5Q969M3 257 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 TAAR8Q969N4 342 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 ADAD1Q96M93 576 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 TSPAN32Q96QS1 320 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 GFM1Q96RP9 751 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 KLHDC3Q9BQ90 382 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 FKRPQ9H9S5 495 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 ZNF304Q9HCX3 659 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 SRA1Q9HD15 236 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 ING3Q9NXR8 418 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 CAMK2AQ9UQM7 478 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 SEC16AO15027 2179 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 A0A1W2PQD3 144 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 TMEM72A0PK05 275 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 CDC14CA4D256 554 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 TO15178 435 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 PIN1P1O15428 100 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 NDUFB5O43674 189 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 NUDT21O43809 227 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 DUX1O43812 170 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 EIF4E2O60573 245 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 TSPAN2O60636 221 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 ZFPL1O95159 310 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 CXCR1P25024 350 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 BTCP35070 178 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 SRP9P49458 86 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 CSNK1EP49674 416 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 NR0B1P51843 470 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 EFNA3P52797 238 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 RAB25P57735 213 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 MRPL28Q13084 256 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 NSDHLQ15738 373 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 MESTQ5EB52 335 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 VWA2Q5GFL6 755 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 UBE2NLQ5JXB2 153 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 GPR139Q6DWJ6 353 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 LIX1LQ8IVB5 337 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 C9orf40Q8IXQ3 194 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 TIGD4Q8IY51 512 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 D2HGDHQ8N465 521 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 TOMM5Q8N4H5 51 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 LGALS14Q8TCE9 139 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 ADAMTS14Q8WXS8 1223 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 AKAP1Q92667 903 aaKnown RBP eCLIP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 RNF166Q96A37 237 aaPredicted RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 ZFP3Q96NJ6 502 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 TMEM246Q9BRR3 403 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 RTN4RQ9BZR6 473 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 NRSN2Q9GZP1 204 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 PRO3102Q9H379 93 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 RABL2AQ9UBK7 228 aaPredicted RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 COPS7AQ9UBW8 275 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 ZNF346Q9UL40 294 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 RABL2BQ9UNT1 228 aa7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 MRPS7Q9Y2R9 242 aaKnown RBP7.56□□□□□ -1.2
SND1-IT1-201ENST00000623342 LAMA5O15230 3695 aa7.55□□□□□ -1.2
SND1-IT1-201ENST00000623342 ACOD1A6NK06 481 aa7.55□□□□□ -1.2
SND1-IT1-201ENST00000623342 ALG1L2C9J202 215 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms