RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 UPK3AO75631 287 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 KRT33AO76009 404 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 FAM107AO95990 144 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 WNT11O96014 354 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 HNRNPCL4P0DMR1 293 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 SLC6A2P23975 617 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 AQP1P29972 269 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 CRYBA2P53672 197 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 PCBP3P57721 371 aaKnown RBP9.73□□□□□ -0.85
TARDBP-221ENST00000619555 COPZ1P61923 177 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 TUBA1BP68363 451 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 TUBA4AP68366 448 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 VLDLRP98155 873 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 HOXC5Q00444 222 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 SWI5Q1ZZU3 235 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 TBRG1Q3YBR2 411 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 GLIPR1L2Q4G1C9 344 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 C1orf140Q5VVS0 124 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 PRAMEF8Q5VWM4 474 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 PRAMEF7Q5VXH5 474 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 REEP3Q6NUK4 255 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 KLHL24Q6TFL4 600 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 CREB3L2Q70SY1 520 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 TUBA1AQ71U36 451 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 LINGO2Q7L985 606 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 SERPINA11Q86U17 422 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 CALHM3Q86XJ0 350 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 EPHX4Q8IUS5 362 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 PHC2Q8IXK0 858 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 KDM8Q8N371 416 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 OR8J3Q8NGG0 315 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 OR1K1Q8NGR3 316 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 BBS10Q8TAM1 723 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 PROX1Q92786 737 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 C3orf49Q96BT1 292 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 KCNK17Q96T54 332 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 WFDC6Q9BQY6 131 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 TAPBPLQ9BX59 468 aa9.73□□□□□ -0.85
TARDBP-221ENST00000619555 NBEAL1Q6ZS30 2694 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 A0A096LPE4 126 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 A0A1W2PPZ6 126 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 TMEM229AB2RXF0 380 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 C5orf58C9J3I9 102 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 ZNF587BE7ETH6 402 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 NPIPB7O75200 414 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 F12P00748 615 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-221ENST00000619555 NPPAP01160 153 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 FAM157CP0CG43 387 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 IGHV4-31P0DP07 118 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 BMP4P12644 408 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 ETS2P15036 469 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 USF1P22415 310 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-221ENST00000619555 LARS2Q15031 903 aaKnown RBP9.72□□□□□ -0.85
TARDBP-221ENST00000619555 CYP51A1Q16850 503 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 RNF220Q5VTB9 566 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 CYB5R2Q6BCY4 276 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 NIPAL3Q6P499 406 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 ARIH2OSQ8N7S6 290 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 PCYOX1LQ8NBM8 494 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 HIPK4Q8NE63 616 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 BCL2L2Q92843 193 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-221ENST00000619555 SLC25A36Q96CQ1 311 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 BOD1Q96IK1 185 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 ZNF583Q96ND8 569 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 ALKBH3Q96Q83 286 aaPredicted RBP9.72□□□□□ -0.85
TARDBP-221ENST00000619555 SLC38A2Q96QD8 506 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 SPATA9Q9BWV2 254 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 SEC61A2Q9H9S3 476 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 ARL8BQ9NVJ2 186 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 CMTM6Q9NX76 183 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 ZNF232Q9UNY5 417 aa9.72□□□□□ -0.85
TARDBP-221ENST00000619555 TMEM247A6NEH6 219 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 FTCDNL1E5RQL4 147 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 PHF1O43189 567 aaPredicted RBP9.71□□□□□ -0.86
TARDBP-221ENST00000619555 MFN2O95140 757 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 VAMP5O95183 116 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 AHSA1O95433 338 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 OPN1SWP03999 348 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 CSF3P09919 207 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 PNMTP11086 282 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 ZNF16P17020 682 aaPredicted RBP9.71□□□□□ -0.86
TARDBP-221ENST00000619555 PRDX6P30041 224 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 PCGF2P35227 344 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 SERPINF1P36955 418 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 PDLIM4P50479 330 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 NUDT2P50583 147 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 UBE2NP61088 152 aaKnown RBP9.71□□□□□ -0.86
TARDBP-221ENST00000619555 LSM11P83369 360 aaKnown RBP eCLIP9.71□□□□□ -0.863e-9■■□□□ 11.9
TARDBP-221ENST00000619555 EGR4Q05215 589 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 RBBP4Q09028 425 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 GGTLC2Q14390 218 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 CARTPTQ16568 116 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 VMACQ2NL98 169 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 ZNF311Q5JNZ3 666 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 C1QTNF12Q5T7M4 302 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 ANKRD16Q6P6B7 361 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 VHLLQ6RSH7 139 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 ABHD12BQ7Z5M8 362 aaPredicted RBP9.71□□□□□ -0.86
TARDBP-221ENST00000619555 SLC15A3Q8IY34 581 aa9.71□□□□□ -0.86
TARDBP-221ENST00000619555 FITM2Q8N6M3 262 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms