RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 LAT2Q9GZY6 243 aa23.03■■□□□ 1.28
VEGFC-202ENST00000618562 PPIL3Q9H2H8 161 aaKnown RBP23.03■■□□□ 1.28
VEGFC-202ENST00000618562 B4E171 279 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 RGS13O14921 159 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 LYRM1O43325 122 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 IDH3BO43837 385 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 ZNF354AO60765 605 aaPredicted RBP23.02■■□□□ 1.28
VEGFC-202ENST00000618562 GYPBP06028 91 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 GSTT2P0CG29 244 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 GSTT2BP0CG30 244 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 TSPAN7P41732 249 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 ACTA2P62736 377 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 ACTG2P63267 376 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 DBPQ10586 325 aaPredicted RBP23.02■■□□□ 1.28
VEGFC-202ENST00000618562 CCDC157Q569K6 752 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 CEACAM19Q7Z692 300 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 NAXDQ8IW45 347 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 CAPSLQ8WWF8 208 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 DDX28Q9NUL7 540 aaKnown RBP23.02■■□□□ 1.28
VEGFC-202ENST00000618562 EXTL2Q9UBQ6 330 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 GPN3Q9UHW5 284 aaPredicted RBP23.02■■□□□ 1.28
VEGFC-202ENST00000618562 NXT1Q9UKK6 140 aaKnown RBP23.02■■□□□ 1.28
VEGFC-202ENST00000618562 TRBV11-1A0A0K0K1C0 115 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 TMEM200CA6NKL6 621 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 HIST1H1CP16403 213 aaKnown RBP23.02■■□□□ 1.28
VEGFC-202ENST00000618562 HLA-DMAP28067 261 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 THBS2P35442 1172 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 IFITM2Q01629 132 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 TMEM53Q6P2H8 277 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 SFXN4Q6P4A7 337 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 SYS1Q8N2H4 156 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 FAM98AQ8NCA5 519 aaKnown RBP23.02■■□□□ 1.28
VEGFC-202ENST00000618562 C19orf25Q9UFG5 118 aaPredicted RBP23.02■■□□□ 1.28
VEGFC-202ENST00000618562 RBMX2Q9Y388 322 aaKnown RBP23.02■■□□□ 1.28
VEGFC-202ENST00000618562 NPFFR2Q9Y5X5 522 aa23.02■■□□□ 1.28
VEGFC-202ENST00000618562 MPDZO75970 2070 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 A0A0B4J293 547 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 OR6C70A6NIJ9 312 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 OR2T7P0C7T2 308 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 ZNF806P0C7X5 589 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 TALDO1P37837 337 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 SLC26A5P58743 744 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 SDR9C7Q8NEX9 313 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 OR2T27Q8NH04 317 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 CNN2Q99439 309 aaKnown RBP23.01■■□□□ 1.27
VEGFC-202ENST00000618562 TBL1XR1Q9BZK7 514 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 ST6GALNAC2Q9UJ37 374 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 B3GALT1Q9Y5Z6 326 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 CACNA1HO95180 2353 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 NDUFB5O43674 189 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 FADS1O60427 444 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 FAM157BP0CG42 384 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 RBMS1P29558 406 aaKnown RBP23.01■■□□□ 1.27
VEGFC-202ENST00000618562 PYCR1P32322 319 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 INPP1P49441 399 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 LGALS3BPQ08380 585 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 PAMR1Q6UXH9 720 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 DPY19L2P2Q6ZN68 376 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 ATG4DQ86TL0 474 aaPredicted RBP23.01■■□□□ 1.27
VEGFC-202ENST00000618562 OR5J2Q8NH18 312 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 OR4K13Q8NH42 304 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 CCNL2Q96S94 520 aaPredicted RBP23.01■■□□□ 1.27
VEGFC-202ENST00000618562 SLC19A3Q9BZV2 496 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 TP63Q9H3D4 680 aaPredicted RBP23.01■■□□□ 1.27
VEGFC-202ENST00000618562 MARCH7Q9H992 704 aa23.01■■□□□ 1.27
VEGFC-202ENST00000618562 CENPXA8MT69 81 aa23■■□□□ 1.27
VEGFC-202ENST00000618562 MCIDASD6RGH6 385 aa23■■□□□ 1.27
VEGFC-202ENST00000618562 HCRTR2O43614 444 aa23■■□□□ 1.27
VEGFC-202ENST00000618562 SERPINA3P01011 423 aa23■■□□□ 1.27
VEGFC-202ENST00000618562 EVI2BP34910 448 aa23■■□□□ 1.27
VEGFC-202ENST00000618562 ISXQ2M1V0 245 aa23■■□□□ 1.27
VEGFC-202ENST00000618562 SSX6Q7RTT6 188 aa23■■□□□ 1.27
VEGFC-202ENST00000618562 UBE2J2Q8N2K1 259 aa23■■□□□ 1.27
VEGFC-202ENST00000618562 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23■■□□□ 1.27
VEGFC-202ENST00000618562 IER3IP1Q9Y5U9 82 aa23■■□□□ 1.27
VEGFC-202ENST00000618562 ZNF318Q5VUA4 2279 aa23■■□□□ 1.27
VEGFC-202ENST00000618562 PCNX3Q9H6A9 2034 aa23■■□□□ 1.27
VEGFC-202ENST00000618562 IGKV1D-42A0A075B6H8 117 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 UMODP07911 640 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 SF3B4Q15427 424 aaKnown RBP eCLIP22.99■■□□□ 1.27
VEGFC-202ENST00000618562 NDUFA5Q16718 116 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 FAM27D1Q5T7N8 215 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 OR8K3Q8NH51 312 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 GHSRQ92847 366 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 ZMYND19Q96E35 227 aaPredicted RBP22.99■■□□□ 1.27
VEGFC-202ENST00000618562 AKAP7Q9P0M2 348 aaPredicted RBP22.99■■□□□ 1.27
VEGFC-202ENST00000618562 RASD1Q9Y272 281 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 ZNF337Q9Y3M9 751 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 LOXL2Q9Y4K0 774 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 A0A0G2JK05 382 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 FAM240BA0A1B0GVZ2 78 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 ADAM10O14672 748 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 ARPC3O15145 178 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 OGG1O15527 345 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 TRIM3O75382 744 aaPredicted RBP22.99■■□□□ 1.27
VEGFC-202ENST00000618562 KLF7O75840 302 aaPredicted RBP22.99■■□□□ 1.27
VEGFC-202ENST00000618562 TFP02787 698 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 PSKH1P11801 424 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 ACVR1BP36896 505 aa22.99■■□□□ 1.27
VEGFC-202ENST00000618562 CLDN6P56747 220 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms