RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 IDH3GP51553 393 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 SLC18A1P54219 525 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 FADDQ13158 208 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 CEACAM16Q2WEN9 425 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 IQCCQ4KMZ1 466 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 FAM120AOSQ5T036 256 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 COMTD1Q86VU5 262 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 ANKK1Q8NFD2 765 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 ZNF417Q8TAU3 575 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 ZNF587Q96SQ5 575 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 RAD21L1Q9H4I0 556 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 C12orf10Q9HB07 376 aa18.01■□□□□ 0.47
TRAPPC3-208ENST00000616074 IGKV1D-42A0A075B6H8 117 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 A0A1B0GWA3 101 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 C5orf58C9J3I9 102 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 ZNF23P17027 643 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 GRPRP30550 384 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 PRKAR1BP31321 381 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 THBS4P35443 961 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 MAGOHP61326 146 aaKnown RBP18■□□□□ 0.47
TRAPPC3-208ENST00000616074 C1DQ13901 141 aaKnown RBP18■□□□□ 0.47
TRAPPC3-208ENST00000616074 FAM69AQ5T7M9 428 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 GPR137CQ8N3F9 429 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 LSMEM1Q8N8F7 131 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 SLC38A4Q969I6 547 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 OR2M2Q96R28 347 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 SOX7Q9BT81 388 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 RAB1BQ9H0U4 201 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 ZNF442Q9H7R0 627 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 CRLF2Q9HC73 371 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 NKIRAS1Q9NYS0 192 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 SLC25A37Q9NYZ2 338 aa18■□□□□ 0.47
TRAPPC3-208ENST00000616074 IGHV2OR16-5A0A0B4J2B6 119 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 hCG_2039718K7EN88 272 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 TRAF3IP2O43734 574 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 OR2T1O43869 369 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 SEC14L2O76054 403 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 ETS2P15036 469 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 CBLP22681 906 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 THBS2P35442 1172 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 SRSF2Q01130 221 aaKnown RBP17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 NPRL3Q12980 569 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 PHYHD1Q5SRE7 291 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 C5orf46Q6UWT4 87 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 MSRB3Q8IXL7 192 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 C10orf111Q8N326 155 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 SVOPLQ8N434 492 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 GOLGA6L1Q8N7Z2 621 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 NFKBIDQ8NI38 313 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 USH1CQ9Y6N9 552 aa17.99■□□□□ 0.47
TRAPPC3-208ENST00000616074 TRAV36DV7A0A075B6V5 113 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 STAMBPO95630 424 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 ARAFP10398 606 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 NPR2P20594 1047 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 ARR3P36575 388 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 IL1RL1Q01638 556 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 GLIPR1L2Q4G1C9 344 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 ALG10BQ5I7T1 473 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 EPGNQ6UW88 154 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 H1FNTQ75WM6 255 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 SPATA21Q7Z572 469 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 MDP1Q86V88 176 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 TMEM123Q8N131 208 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 ZCCHC24Q8N2G6 241 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 ZNF540Q8NDQ6 660 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 PIK3C3Q8NEB9 887 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 DOK1Q99704 481 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 SLAMF8Q9P0V8 285 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 KLHL14Q9P2G3 628 aa17.98■□□□□ 0.47
TRAPPC3-208ENST00000616074 TMEM129A0AVI4 362 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 LRP5LA4QPB2 252 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 ZNF99A8MXY4 864 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 M0R3G1 203 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 AKAP8O43823 692 aaKnown RBP17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 TPST1O60507 370 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 HPRP00739 348 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 TGFAP01135 160 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 HLA-DOBP13765 273 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 DAOP14920 347 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 CAPZA2P47755 286 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 LRIF1Q5T3J3 769 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 GCNT6Q5T4J0 391 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 DHRS4L2Q6PKH6 230 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 ADPRHL1Q8NDY3 354 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 DNAJA4Q8WW22 397 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 TLCD1Q96CP7 247 aa17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 FBXO9Q9UK97 447 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-208ENST00000616074 LOC102725191A0A1B0GVB3 256 aa17.96■□□□□ 0.47
TRAPPC3-208ENST00000616074 MS4A18H0YCH9 400 aa17.96■□□□□ 0.47
TRAPPC3-208ENST00000616074 IGFBP1P08833 259 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC3-208ENST00000616074 HNF1AP20823 631 aa17.96■□□□□ 0.47
TRAPPC3-208ENST00000616074 GIFP27352 417 aa17.96■□□□□ 0.47
TRAPPC3-208ENST00000616074 MRPL19P49406 292 aaKnown RBP17.96■□□□□ 0.47
TRAPPC3-208ENST00000616074 STX1BP61266 288 aa17.96■□□□□ 0.47
TRAPPC3-208ENST00000616074 SNTB2Q13425 540 aaKnown RBP17.96■□□□□ 0.47
TRAPPC3-208ENST00000616074 MS4A18Q3C1V0 323 aa17.96■□□□□ 0.47
TRAPPC3-208ENST00000616074 CARD17Q5XLA6 110 aa17.96■□□□□ 0.47
TRAPPC3-208ENST00000616074 NET1Q7Z628 596 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC3-208ENST00000616074 FUNDC1Q8IVP5 155 aa17.96■□□□□ 0.47
TRAPPC3-208ENST00000616074 UEVLDQ8IX04 471 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms