RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 UBQLN3Q9H347 655 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 KLHL13Q9P2N7 655 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 TMEM72A0PK05 275 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 PIP5K1CO60331 668 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 YES1P07947 543 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 TFPTP0C1Z6 253 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 GNRHRP30968 328 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 MAP2K6P52564 334 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 FXYD6P3P58550 94 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 PHC1P78364 1004 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 NKPD1Q17RQ9 610 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 RNASE10Q5GAN6 216 aaKnown RBP8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 NKAIN4Q8IVV8 208 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 Q8N402 240 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF615Q8N8J6 731 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 OR11L1Q8NGX0 322 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 ZFAND2BQ8WV99 257 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 NRG4Q8WWG1 115 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 AKAP1Q92667 903 aaKnown RBP eCLIP8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 C12orf49Q9H741 205 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 FKRPQ9H9S5 495 aa8.66□□□□□ -1.02
CLTCL1-208ENST00000615606 LINC01387J3KSC0 135 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 SPINT1O43278 529 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 FBXO45P0C2W1 286 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 GSTT2P0CG29 244 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 GM2AP17900 193 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 MMP11P24347 488 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 HTR1FP30939 366 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 MAGEA2P43356 314 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 AP2S1P53680 142 aaPredicted RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 SLX4IPQ5VYV7 408 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 JMJD6Q6NYC1 403 aaPredicted RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF793Q6ZN11 406 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 SSX6Q7RTT6 188 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 SPARTQ8N0X7 666 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 TMEM102Q8N9M5 508 aaPredicted RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 SLC37A3Q8NCC5 494 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 DNAAF1Q8NEP3 725 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 PIGCQ92535 297 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 SLC25A44Q96H78 314 aaPredicted RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 PAPOLGQ9BWT3 736 aaKnown RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 MED20Q9H944 212 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 HIF3AQ9Y2N7 669 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF281Q9Y2X9 895 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 TMEM212A6NML5 194 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 SERPINA5P05154 406 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 OR8G3PP0DMU2 310 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 NAGAP17050 411 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 PRKACBP22694 351 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 RGS6P49758 472 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 NCS1P62166 190 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 FAM199XQ6PEV8 388 aaPredicted RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 TMEM205Q6UW68 189 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 RBM45Q8IUH3 476 aaKnown RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 GJC3Q8NFK1 279 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 PFN4Q8NHR9 129 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 THAP6Q8TBB0 222 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 TRMT10AQ8TBZ6 339 aaKnown RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 LRRC20Q8TCA0 184 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 C17orf50Q8WW18 174 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF582Q96NG8 517 aaPredicted RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 PLAC1Q9HBJ0 212 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 COPZ2Q9P299 210 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 FBXL4Q9UKA2 621 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 PATE3B3GLJ2 98 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 SCGB1D2O95969 90 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 RAC2P15153 192 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 IFNGR1P15260 489 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 CEBPGP53567 150 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 UBE2IP63279 158 aaKnown RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 HSF1Q00613 529 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 SQSTM1Q13501 440 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 Q6ZPB1 254 aaPredicted RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 VN1R4Q7Z5H5 301 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 PM20D2Q8IYS1 436 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 DNAJC5GQ8N7S2 189 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 CASTOR1Q8WTX7 329 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF845Q96IR2 970 aaPredicted RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 NECAB3Q96P71 396 aaPredicted RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 FAM173AQ9BQD7 235 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 C12orf4Q9NQ89 552 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 B3GNT3Q9Y2A9 372 aa8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 AK6Q9Y3D8 172 aaKnown RBP8.65□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF236Q9UL36 1845 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 TRAV18A0A075B6X5 111 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 TIMM8AO60220 97 aaPredicted RBP8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 DPM1O60762 260 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 GLCEO94923 617 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 PRH1P02810 166 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 PRR35P0CG20 571 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 CRHBPP24387 322 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 CD82P27701 267 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 ARRB2P32121 409 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 OR1C1Q15619 314 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 EMC4Q5J8M3 183 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 SLC25A25Q6KCM7 469 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 ANKRD37Q7Z713 158 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 D2HGDHQ8N465 521 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 TMEM151AQ8N4L1 468 aa8.65□□□□□ -1.03
CLTCL1-208ENST00000615606 DNAJC22Q8N4W6 341 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms